Alternatives and similar repositories for HebSafeHarbor

Users that are interested in HebSafeHarbor are comparing it to the libraries listed below

• OHDSI / ClinicalTrialsWGETL
  [under development] ETL materials to support proposal for CDM enhancements for clinical trial data
  ☆24Updated 4 years ago
• tomolopolis / SNOMED-CT_Analysis
  Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work
  ☆14Updated 5 years ago
• skparr / ml_loinc_mapping
  ☆17Updated 7 years ago
• spe-uob / 2020-HealthcareLakeETL
  FHIR to OMOP using PySpark on AWS Glue
  ☆14Updated 4 years ago
• clinical-ai / omop-etl
  ETL Tool for converting datasets to OMOP CDM
  ☆35Updated 3 years ago
• dermatologist / fhiry
  FHIR to pandas dataframe for data analytics, AI and ML!
  ☆44Updated last week
• jbadger3 / inspectomop
  ☆14Updated 10 months ago
• BHFDSC / Linked-EHR-England-2021
  Publication: Linked electronic health records for research on a nationwide cohort including over 54 million people in England
  ☆19Updated 2 years ago
• snovaisg / ICD-Mappings
  This python tool enables a variety of mappings of ICD codes (International Classification of Diseases) to different medical concepts with…
  ☆36Updated last year
• aphp / eds-scikit
  eds-scikit is a Python library providing tools to process and analyse OMOP data
  ☆44Updated last year
• nedap / deidentify
  A Python library to de-identify medical records with state-of-the-art NLP methods.
  ☆142Updated last month
• dermatologist / pyomop
  Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.
  ☆56Updated last week
• AberystwythSystemsBiology / MEDIALpy
  A small python package that allows the user to look up common medical abbreviations.
  ☆12Updated 3 years ago
• dermatologist / hephaestus
  Hephaestus - ETL and ML tools for OHDSI - OMOP CDM
  ☆13Updated 3 months ago
• Melbourne-BMDS / mimic34md2020_materials
  ☆23Updated 3 years ago
• drivendataorg / snomed-ct-entity-linking
  Winners of the SNOMED CT Entity Linking Challenge
  ☆43Updated last year
• p-easter / Python_DataDictionary
  Medium Article
  ☆11Updated 4 years ago
• OHDSI / Radiology-CDM
  Pilot model and converter for integration of radiology data into OMOP-CDM
  ☆23Updated 6 years ago
• icd-codex / icd-codex
  python library for graphical and continuous representations of ICD9 and ICD10 codes
  ☆41Updated last week
• OHDSI / Perseus
  [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack
  ☆38Updated 2 years ago
• DHLab-TSENG / lab
  An R package for generating analysis-ready data from laboratory records
  ☆15Updated 2 years ago
• obi-ml-public / ehr_deidentification
  Robust de-identification of medical notes using transformer architectures
  ☆57Updated 3 years ago
• covidclinical / visualization-notebooks
  Jupyter Notebooks and other code for 4CE data visualizations.
  ☆13Updated 2 years ago
• coderxio / parserx
  A modern, lightweight medication sig parser.
  ☆12Updated 11 months ago
• Health-Informatics-UoN / carrot-mapper
  Streamlined Data Mapping to OMOP
  ☆19Updated this week
• 8400TheHealthNetwork / HebSpacy
  Hebrew oriented NER spaCy pipeline
  ☆21Updated last year
• anand-subu / automated-clinical-coding-llm
  ☆28Updated last year
• PEDSnet / Data-Quality-Analysis
  The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)
  ☆26Updated 4 years ago
• drivendataorg / snomed-ct-entity-linking-runtime
  Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData
  ☆14Updated last year
• dhchenx / umls-similarity
  Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)
  ☆16Updated 3 years ago