This repository contains the official implementation of the paper "BioGraphFusion: Graph Knowledge Embedding for Biological Completion and Reasoning" accepted by Bioinformatics.
☆16Nov 5, 2025Updated 10 months ago
Alternatives and similar repositories for BioGraphFusion
Users that are interested in BioGraphFusion are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [Paper][AAAI 2026] UniHR: Hierarchical Representation Learning for Unified Knowledge Graph Link Prediction☆18Nov 3, 2025Updated 10 months ago
- SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network☆15Nov 17, 2022Updated 3 years ago
- ☆10Nov 17, 2020Updated 5 years ago
- [NeurIPS 2023] TFLEX: Temporal Feature-Logic Embedding Framework for Complex Reasoning over Temporal Knowledge Graph☆46Oct 17, 2025Updated 11 months ago
- HyPe: Better Pre-trained Language Model Fine-tuning with Hidden Representation Perturbation [ACL 2023]☆14Jul 11, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A PyTorch implementation of Proxy Anchor Loss based on CVPR 2020 paper "Proxy Anchor Loss for Deep Metric Learning"☆11Jan 16, 2021Updated 5 years ago
- Code for ACL 2023 Oral Paper: ManagerTower: Aggregating the Insights of Uni-Modal Experts for Vision-Language Representation Learning☆12Aug 23, 2025Updated last year
- Investigating the role of pre-training dataset size and diversity on the performance of single-cell foundation models☆21May 12, 2026Updated 4 months ago
- [ICML2022] "Identity-Disentangled Adversarial Augmentation for Self-Supervised Learning"☆10Jul 24, 2022Updated 4 years ago
- ☆11Jul 25, 2020Updated 6 years ago
- ☆24Aug 13, 2026Updated last month
- https://www.kaggle.com/c/nbme-score-clinical-patient-notes☆10Sep 1, 2022Updated 4 years ago
- Japanese translation of "Deep learning for molecules and materials book"☆16Oct 11, 2022Updated 3 years ago
- Code search model based the self-attention☆12Oct 16, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- PLMFit platform for TL on PLMs☆22Aug 13, 2025Updated last year
- this is a work about UpliftRec☆10Dec 10, 2024Updated last year
- ChemPile project☆19Jul 31, 2025Updated last year
- Code for the paper "Pretrained Models for Multilingual Federated Learning" at NAACL 2022☆11Aug 9, 2022Updated 4 years ago
- Official PyTorch implementation of POEM (Partial Observation Experts Modelling) as introduced in the paper Contrastive Meta-Learning for …☆12Nov 1, 2023Updated 2 years ago
- ☆11Aug 31, 2024Updated 2 years ago
- Decoding Single-Cell Omics of Perturbation Responses Using DeSCOPE☆27Updated this week
- Pre-training Multi-task Contrastive Learning Models for Scientific Literature Understanding (Findings of EMNLP'23)☆11Aug 24, 2024Updated 2 years ago
- ☆14Jun 19, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- KERL: reinforcement learning algorithms and tools implemented using Keras☆11Aug 2, 2024Updated 2 years ago
- A Python package and command-line interface for extracting knowledge graphs from text, with a special focus on supporting agents working …☆23Jan 13, 2026Updated 8 months ago
- Tree-Invent: A novel molecular generative model constrained with topological tree☆14Jul 26, 2023Updated 3 years ago
- Large language model Mistral for DNA☆25Sep 12, 2025Updated last year
- ☆14Mar 2, 2023Updated 3 years ago
- ☆14Oct 25, 2024Updated last year
- Unsupervised tableQA and databaseQA on chinese finance question and tabular data☆13Apr 20, 2023Updated 3 years ago
- [SIGKDD 2024] Rethinking Fair Graph Neural Networks from Re-balancing☆10Jul 15, 2024Updated 2 years ago
- 本项目采用BERT等预训练模型实现多项选择型阅读理解任务（Multiple Choice MRC）☆16Jun 20, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆24Mar 25, 2025Updated last year
- Beyond Graph Convolution: Multimodal Recommendation with Topology-aware MLPs☆13Jan 28, 2025Updated last year
- ☆25Dec 17, 2025Updated 9 months ago
- ☆12Jul 28, 2023Updated 3 years ago
- WWW'24, Mirror Gradient (MG) makes multimodal recommendation models approach flat local minima easier compared to models with normal trai…☆17Nov 1, 2024Updated last year
- Variance Covariance Regularization☆14Jun 22, 2023Updated 3 years ago
- [NeurIPS 2023] The source code of "Equivariant Spatio-Temporal Attentive Graph Networks to Simulate Physical Dynamics"☆28Aug 6, 2024Updated 2 years ago