Alternatives and similar repositories for MOL-Mamba

Users that are interested in MOL-Mamba are comparing it to the libraries listed below

• schwallergroup / mhnn
  Molecular Hypergraph Neural Network
  ☆38Updated 2 weeks ago
• Suryanarayanan-Balaji / GPT-MolBERTa
  ☆13Updated last year
• bowen-gao / ProFSA
  [ICLR 2024] ProFSA: Self-supervised Pocket Pretraining via Protein Fragment-Surroundings Alignment
  ☆12Updated last year
• conghaowang / GLDM
  ☆18Updated 6 months ago
• uta-smile / CD-MVGNN
  ☆14Updated 3 years ago
• GLAD-RUC / ESTAG
  The source code of "Equivariant Spatio-Temporal Attentive Graph Networks to Simulate Physical Dynamics"
  ☆24Updated 11 months ago
• KemperNiklas / FragNet
  Official Implementation of Expressivity and Generalization: Fragment-Biases for Molecular GNNs
  ☆19Updated 8 months ago
• smiles724 / MROT
  ☆12Updated last month
• LanceKnight / MolKGNN
  MolKGNN is a deep learning model for predicting biological activity or molecular properties. It features in 1. SE(3)-invariance 2. confor…
  ☆13Updated last year
• HUBioDataLab / ProtBENCH
  ☆12Updated last year
• molecule-generator-collection / ChatChemTS
  ☆17Updated 3 months ago
• CQ-zhang-2016 / Rag2Mol
  Structure-based drug design based on Retrieval Augmented Generation
  ☆18Updated 9 months ago
• idrugLab / hignn
  Code for "HiGNN: A Hierarchical Informative Graph Neural Network for Molecular Property Prediction Equipped with Feature-Wise Attention"
  ☆50Updated 2 years ago
• fork123aniket / Molecule-Graph-Generation
  Molecule Graph Generation using Graph Convolutional Networks-based Variational Graph AutoEncoders (VGAE) in PyTorch
  ☆23Updated 8 months ago
• wangzhehyd / fastsmcg
  Data and code required to reach the main conclusions of the fastsmcg paper
  ☆10Updated last year
• MolecularAI / reinforcement-learning-active-learning
  ☆11Updated last year
• zaixizhang / FLAG
  Implementation of ICLR23 paper "Molecule Generation for Target Protein Binding with Structural Motifs"
  ☆69Updated last year
• mahsasheikh / DrugGen
  DrugGen: Advancing Drug Discovery with Large Language Models and Reinforcement Learning Feedback
  ☆16Updated last month
• yazdanimehdi / AttentionSiteDTI
  This is The repository for Paper "AttentionSiteDTI: Attention Based Model for Predicting Drug-Target Interaction Using Graph Representati…
  ☆44Updated last year
• 595693085 / WGNN-DTA
  a method for CPI and DTA prediction
  ☆11Updated 3 years ago
• mamei1016 / DGNN-DDI
  source for paper DGNN-DDI
  ☆10Updated last year
• BiomedSciAI / r-BRICS
  Revised breaking of retrosynthetically interesting chemical substructures (r-BRICS) – a revised BRICS module based on rdKit that breaks r…
  ☆10Updated 4 months ago
• Vencent-Won / SGGRL
  The implementation of the paper "Multi-Modal Representation Learning for Molecular Property Prediction: Sequence, Graph, Geometry".
  ☆43Updated 7 months ago
• davidbuterez / mf-pcba
  Source code accompanying the 'MF-PCBA: Multi-fidelity high-throughput screening benchmarks for drug discovery and machine learning' paper
  ☆27Updated last month
• keiserlab / autofragdiff
  Autoregressive fragment-based diffusion for target-aware ligand design
  ☆29Updated last year
• anny0316 / Drug3D-Net
  A Spatial-temporal Gated Attention Module for Molecular Property Prediction Based on Molecular Geometry
  ☆32Updated 4 years ago
• AI-HPC-Research-Team / SLM4Mol
  A quantitative benchmark and analysis of molecular large language models.
  ☆16Updated last month
• LBBSoft / DeepCDA
  DeepCDA
  ☆14Updated 5 years ago
• GIST-CSBL / BayeshERG
  BayeshERG Official Repository
  ☆14Updated last month
• DongkiKim95 / Mol-LLaMA
  Official Code Repository for the paper "Mol-LLaMA: Towards General Understanding of Molecules in Large Molecular Language Model"
  ☆17Updated 2 months ago