wwu-mmll / deepbetLinks
Fast brain extraction using neural networks
☆41Updated last year
Alternatives and similar repositories for deepbet
Users that are interested in deepbet are comparing it to the libraries listed below
Sorting:
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆74Updated last month
- Preprocessing of arterial spin labeling (ASL) data☆51Updated this week
- Preprocessing of diffusion MRI☆163Updated last month
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆45Updated 3 weeks ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆30Updated last year
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆54Updated this week
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆31Updated last year
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆65Updated 2 weeks ago
- niimath - a clone of fslmaths. Try the live demo:☆68Updated last month
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆110Updated this week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆70Updated last year
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- Bash script to compute DTI-ALPS☆61Updated last week
- ☆28Updated last year
- Processing tools for high-resolution neuroimaging☆71Updated 9 months ago
- ☆39Updated 3 years ago
- Synthetic BOLD images for distortion correction of fMRI without additional calibration scans☆27Updated last month
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆109Updated 3 weeks ago
- A suite of brain PET processing pipelines☆14Updated 8 months ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆102Updated this week
- DICOM to NIfTI conversion, NIfTI tools☆100Updated 3 weeks ago
- ☆39Updated 2 months ago
- DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning☆99Updated last month
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆30Updated last week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆151Updated this week
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆40Updated last year
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆19Updated 5 months ago
- BIDS app wrapping recon-all from FreeSurfer☆43Updated last week
- Computational Anatomy Toolbox for SPM12 or SPM25☆36Updated this week