Alternatives and similar repositories for SmartR

Users that are interested in SmartR are comparing it to the libraries listed below

• transmart / transmartApp
  tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlati…
  ☆71Updated 7 years ago
• ISA-tools / biopy-isatab
  Python parser for ISAtab, a biological file format for experimental metadata
  ☆16Updated 8 years ago
• NCBI-Hackathons / PubRunner
  Framework for running text mining tools on latest publications. Main page at:
  ☆14Updated 3 years ago
• phenopolis / phenopolis
  An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data
  ☆33Updated 3 years ago
• verilylifesciences / variant-qc
  Quality control methods for human genomic variants.
  ☆62Updated 3 years ago
• Caleydo / caleydo
  Caleydo - Visualization for Molecular Biology
  ☆60Updated 8 years ago
• solvebio / solvebio-python
  SolveBio Python bindings
  ☆20Updated last week
• pschorderet / NEAT
  NExt generation Analysis Toolbox
  ☆14Updated 9 years ago
• nmdp-bioinformatics / dash
  Data Standards Hackathon for NGS based typing.
  ☆14Updated last month
• Novartis / yap
  High throughput, pain-free big data pipelines.
  ☆30Updated 8 years ago
• BenGlicksberg / PatientExploreR
  Dynamic visualization of Electronic Health Record data in the OMOP framework
  ☆29Updated 4 years ago
• KHP-Informatics / bioindocker15
  [Bio in Docker] Symposium 2015
  ☆21Updated 8 years ago
• Bioconductor / GoogleGenomics
  [DEPRECATED] An R package for Google Genomics API queries.
  ☆45Updated 2 years ago
• raphael-group / gd3
  Javascript library for visualizing genomics data with D3.
  ☆19Updated 8 years ago
• CampagneLaboratory / NextflowWorkbench
  An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…
  ☆22Updated 9 years ago
• idekerlab / cyREST
  DEPRECATED. Please visit our new repository (cytoscape/cyREST)
  ☆27Updated 8 years ago
• FDA / fda-hive
  FDA High-performance Integrated Virtual Environment (HIVE)
  ☆38Updated last week
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• YeoLab / flotilla
  Reproducible machine learning analysis of gene expression and alternative splicing data
  ☆126Updated 2 years ago
• OHDSI / FuzzyForest
  [Under development] Random classification and regression trees
  ☆17Updated 10 years ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆48Updated last week
• raphael-group / magi
  A web application from the Raphael Lab for mutation annotation and genome interpretation.
  ☆20Updated 7 years ago
• wenjiegroup / PEDLA
  PEDLA: predicting enhancers with deep learning-based algorithmic framework
  ☆16Updated 9 years ago
• BauerLab / VariantSpark
  VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information
  ☆33Updated 8 years ago
• rpsychologist / PubMed
  DEPRECATED: PubMed datamining in R
  ☆44Updated 7 years ago
• CNAG-Biomedical-Informatics / convert-pheno
  A software toolkit for the interconversion of standard data models for phenotypic data
  ☆15Updated 2 weeks ago
• ENCODE-DCC / snovault
  The SnoVault general purpose hybrid object-relational database
  ☆16Updated last year
• Steven-N-Hart / VariantDB_Challenge
  Finding a scalable alternative to the VCF File for genomics analysis
  ☆14Updated 8 years ago
• leekgroup / derfinder
  R package for DER Finder, a method for differential expression analysis of RNA-seq data
  ☆22Updated 10 years ago
• NCBI-Hackathons / Pharmacogenomics_Prediction_Pipeline_P3
  ☆28Updated 7 years ago