Alternatives and similar repositories for umap

Users that are interested in umap are comparing it to the libraries listed below

• mhahsler / seriation
  Infrastructure for Ordering using Seriation - R Package
  ☆83Updated 2 months ago
• drostlab / philentropy
  Information Theory and Distance Quantification with R
  ☆143Updated 10 months ago
• privefl / bigstatsr
  R package for statistical tools with big matrices stored on disk.
  ☆180Updated 3 months ago
• cytoscape / cyjShiny
  An R/shiny widget for cytoscape.js
  ☆97Updated last year
• talgalili / dendextend
  Extending R's Dendrogram Functionality
  ☆158Updated 3 months ago
• jlmelville / uwot
  An R package implementing the UMAP dimensionality reduction method.
  ☆347Updated last month
• NikNakk / forestmodel
  ☆44Updated last year
• ropensci-archive / umapr
  ARCHIVED Wraps UMAP Algorithm for Dimension Reduction
  ☆111Updated 3 years ago
• AlineTalhouk / diceR
  Diverse Cluster Ensemble in R
  ☆39Updated 4 months ago
• xrobin / pROC
  Display and analyze ROC curves in R
  ☆128Updated 3 months ago
• VPetukhov / ggrastr
  Raster geoms for ggplot2
  ☆228Updated 2 years ago
• jolars / eulerr
  Area-Proportional Euler and Venn Diagrams with Ellipses
  ☆136Updated last month
• trevorld / r-optparse
  command-line optional argument parser
  ☆154Updated last year
• teunbrand / ggnomics
  A small project to add ggplot2 extensions
  ☆80Updated 4 years ago
• const-ae / sparseMatrixStats
  Implementation of the matrixStats API for sparse matrices
  ☆54Updated 6 months ago
• erocoar / gghalves
  ✂️ Easy half-half geoms in ggplot2
  ☆244Updated 2 years ago
• robjohnnoble / ggmuller
  Create Muller Plots of Evolutionary Dynamics
  ☆64Updated last year
• daattali / ddpcr
  🔬 Analysis and visualization of Droplet Digital PCR data in R and on the web
  ☆62Updated last year
• traversc / trqwe
  Performance oriented statistical metrics and utility functions in R
  ☆30Updated 4 years ago
• RGLab / Rtsne.multicore
  R wrapper for Multicore t-SNE
  ☆29Updated 7 years ago
• Bioconductor / BiocManager
  CRAN Package For Managing Bioconductor Packages
  ☆76Updated 4 months ago
• jdonaldson / rtsne
  An R package for t-SNE (t-Distributed Stochastic Neighbor Embedding)
  ☆58Updated 6 years ago
• briatte / ggnetwork
  Geoms to plot networks with ggplot2
  ☆151Updated last month
• rlbarter / superheat
  An r package for generating beautiful and customizable heatmaps
  ☆238Updated 5 years ago
• crj32 / M3C
  Monte Carlo Reference-based Consensus Clustering
  ☆36Updated 5 years ago
• Bioconductor / BiocStickers
  Stickers for some Bioconductor packages - feel free to contribute and/or modify.
  ☆135Updated last month
• benjaminrich / table1
  ☆84Updated last month
• sachsmc / plotROC
  Interactive ROC plots with ggplot + d3.js.
  ☆87Updated 2 months ago
• hhoeflin / hdf5r
  ☆84Updated 9 months ago
• variani / lme4qtl
  Mixed models @lme4 + custom covariances + parameter constraints
  ☆53Updated 4 years ago