Alternatives and similar repositories for steps:

Users that are interested in steps are comparing it to the libraries listed below

• nimble-dev / nimbleEcology
  ☆18Updated this week
• biodiverse / spAbundance
  Univariate and Multivariate Spatial Modeling of Species Abundance
  ☆17Updated 2 weeks ago
• wfithian / multispeciesPP
  Poisson process models for multispecies presence-absence and presence-only data
  ☆13Updated 10 years ago
• nimble-dev / AHMnimble
  Examples from Kéry & Royle's "Applied Hierarchical Modeling in Ecology (Volume I)" converted to NIMBLE
  ☆26Updated 6 years ago
• mikemeredith / IPMbook
  R package with functions and data for the book 'Integrated Population Modeling'
  ☆12Updated 2 years ago
• TobiasRoth / BDAEcology
  Bayesian Data Analysis in Ecology with R, BUGS, and Stan
  ☆14Updated 3 months ago
• ElliotDovers / scampr
  Spatially Correlated, Approximate Modelling of Point patterns in R
  ☆16Updated last year
• heathergaya / JAGS-NIMBLE-Tutorials
  Accessible intro to JAGS/NIMBLE/Bayesian modeling
  ☆16Updated 5 months ago
• Scott-Foster / RISDM
  R package to fit integrated SDM models (with PO, PA and abundance data)
  ☆12Updated last month
• jptwining / PO-PA-Integrated-SDM
  An adaption of the Koshkina et al. 2017 IDSM
  ☆10Updated last year
• iiasa / ibis.iSDM
  Modelling framework for creating Integrated SDMS
  ☆20Updated this week
• iflint1 / ppjsdm
  Point process joint species distribution models
  ☆11Updated 2 weeks ago
• goldingn / GRaF
  Species distribution modelling using Gaussian random fields
  ☆14Updated 8 years ago
• n-a-gilbert / AHM_NIMBLE
  Code from Applied Hierarchical Modeling in Ecology translated to NIMBLE (from JAGS/WinBUGS)
  ☆13Updated 3 years ago
• biodiverse / ubms
  Fit models to data from unmarked animals using Stan. Uses a similar interface to the R package 'unmarked', while providing the advantages…
  ☆37Updated last month
• eco4cast / EFIstandards
  Exploring possible metadata and data formatting standards for comparing Ecological Forecasts
  ☆15Updated last year
• marquetlab / GCM_compareR
  ☆13Updated 4 years ago
• biodiverse / spOccupancy
  Single-species, Multi-species, and Integrated Spatial Occupancy Models
  ☆59Updated 2 weeks ago
• eldarrak / FLightR
  R package to position animals with solar geolocation archival tags
  ☆23Updated 6 months ago
• PhilipMostert / PointedSDMs
  Wrapper function for 'inlabru' for modeling species distribution models from disparate datasets.
  ☆26Updated last week
• sizespectrum / mizer
  Multi-species size-based ecological modelling in R
  ☆39Updated 2 months ago
• spatial-ews / spatialwarnings
  An R package to compute spatial early-warning signals of ecosystem degradation
  ☆16Updated 7 months ago
• r-spatialecology / shar
  Analyse species-habitat associations in R
  ☆20Updated 2 months ago
• jsocolar / flocker
  flexible occupancy estimation in R
  ☆30Updated 2 months ago
• oliviergimenez / multievent_jags_R
  Fit multievent capture-recapture models in R (maximum-likelihood), Nimble and JAGS (Bayesian)
  ☆14Updated 4 years ago
• inlabru-org / fmesher
  Standalone package for mesh/SPDE/GMRF code from the INLA package
  ☆16Updated this week
• aammd / ISEC_stan_course
  A 6 hour course on Stan with Dan Simpson, Vianey Leos-Barajas, and Andrew MacDonald
  ☆20Updated 4 years ago
• BiologicalRecordsCentre / sparta
  Species Presence/Absence R Trends Analyses
  ☆21Updated 9 months ago
• pfmc-assessments / geostatistical_delta-GLMM
  Tool for geostatistical analysis of survey data, for use when estimating an index of abundance
  ☆20Updated last year
• MarieAugerMethe / DFO_HMM_2022
  Workshop on hidden Markov models for DFO 2022
  ☆17Updated 2 years ago