Alternatives and similar repositories for multispeciesPP

Users that are interested in multispeciesPP are comparing it to the libraries listed below

• n-a-gilbert / AHM_NIMBLE
  Code from Applied Hierarchical Modeling in Ecology translated to NIMBLE (from JAGS/WinBUGS)
  ☆13Updated 3 years ago
• steps-dev / steps
  steps: Spatially- and Temporally- Explicit Population Simulator
  ☆19Updated 2 years ago
• iflint1 / ppjsdm
  Point process joint species distribution models
  ☆11Updated 4 months ago
• mikemeredith / IPMbook
  R package with functions and data for the book 'Integrated Population Modeling'
  ☆13Updated 3 years ago
• PhilipMostert / PointedSDMs
  Wrapper function for 'inlabru' for modeling species distribution models from disparate datasets.
  ☆27Updated this week
• jptwining / PO-PA-Integrated-SDM
  An adaption of the Koshkina et al. 2017 IDSM
  ☆10Updated 5 months ago
• nimble-dev / AHMnimble
  Examples from Kéry & Royle's "Applied Hierarchical Modeling in Ecology (Volume I)" converted to NIMBLE
  ☆27Updated 7 years ago
• ecoverseR / ubms
  Fit models to data from unmarked animals using Stan. Uses a similar interface to the R package 'unmarked', while providing the advantages…
  ☆37Updated 4 months ago
• TobiasRoth / BDAEcology
  Bayesian Data Analysis in Ecology with R, BUGS, and Stan
  ☆17Updated 3 weeks ago
• iiasa / ibis.iSDM
  Modelling framework for creating Integrated SDMS
  ☆20Updated 3 weeks ago
• nimble-dev / nimbleEcology
  ☆18Updated 3 months ago
• DrMattG / REcol-verse
  A list of R packages that are focused on Ecology
  ☆14Updated 4 years ago
• Scott-Foster / RISDM
  R package to fit integrated SDM models (with PO, PA and abundance data)
  ☆12Updated 7 months ago
• EdgarSantos-Fernandez / SSNbayes
  SSNbayes: An R package for Bayesian spatial and spatio-temporal analysis in stream network
  ☆19Updated 6 months ago
• ElliotDovers / scampr
  Spatially Correlated, Approximate Modelling of Point patterns in R
  ☆17Updated last year
• r-spatialecology / shar
  Analyse species-habitat associations in R
  ☆21Updated 11 months ago
• ecoverseR / spOccupancy
  Single-species, Multi-species, and Integrated Spatial Occupancy Models
  ☆72Updated 6 months ago
• mikemeredith / AHMbook
  R package with functions and data for the book 'Applied Hierarchical Modeling in Ecology'
  ☆31Updated 3 years ago
• BiologicalRecordsCentre / sparta
  Species Presence/Absence R Trends Analyses
  ☆22Updated last year
• manaakiwhenua / virtualNicheR
  virtualNicheR: creating virtual fundamental and realised niches
  ☆14Updated 4 years ago
• valentinitnelav / plotbiomes
  R package for plotting Whittaker biomes with ggplot2
  ☆40Updated 11 months ago
• sjevelazco / flexsdm
  Useful tools for constructing species distribution models
  ☆56Updated 2 weeks ago
• ecoverseR / spAbundance
  Univariate and Multivariate Spatial Modeling of Species Abundance
  ☆20Updated 3 weeks ago
• marquetlab / GCM_compareR
  ☆13Updated 5 years ago
• eco4cast / EFIstandards
  Exploring possible metadata and data formatting standards for comparing Ecological Forecasts
  ☆15Updated 2 years ago
• mfidino / integrated-occupancy-model
  ☆10Updated last year
• jsocolar / flocker
  flexible occupancy estimation in R
  ☆32Updated 6 months ago
• heathergaya / JAGS-NIMBLE-Tutorials
  Accessible intro to JAGS/NIMBLE/Bayesian modeling
  ☆16Updated last year
• PredictiveEcology / LandR
  Landscape Ecosystem Modelling in R
  ☆17Updated this week
• StanEcology / stanecology.github.io
  ☆37Updated 4 years ago