A pipeline framework for python
☆111Aug 12, 2026Updated this week
Alternatives and similar repositories for pipen
Users that are interested in pipen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A framework for data piping in python☆37May 4, 2026Updated 3 months ago
- A cheat sheet for Bioinformatians.☆11Aug 9, 2017Updated 9 years ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 4 years ago
- WES HLA Typing based on multiple alternative tools☆18Mar 8, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆20Jan 12, 2017Updated 9 years ago
- Easy ETL☆17Aug 12, 2022Updated 4 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 5 years ago
- A novel pipeline framework to accelerate bioinformatics analysis☆31Oct 5, 2025Updated 10 months ago
- ☆23Nov 11, 2024Updated last year
- Prism themes for plotnine, inspired by ggprism.☆18Aug 13, 2025Updated last year
- PopSTR - A Population based microsatellite genotyper☆33Oct 23, 2023Updated 2 years ago
- Modernized flask api builder with validator and openapi.☆16Mar 20, 2024Updated 2 years ago
- Parakit is a tool to analyze the RCCX module, which contain the CYP21A2 gene, using long sequencing reads.☆15Jun 29, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Draw DAGs (directed acyclic graphs) as ASCII art, à la Git☆41Jun 3, 2022Updated 4 years ago
- ☆16Aug 10, 2026Updated last week
- A Grammar of Data Manipulation in python☆289May 7, 2026Updated 3 months ago
- Kamaelia is a toolset that had the aim of making working with concurrency simple and reusable. It is now retired in favour of Guild. (Thi…☆15Aug 17, 2025Updated last year
- Quickly get coverage statistics given reads and an assembly☆17May 13, 2024Updated 2 years ago
- A fork of http://pydispatcher.sourceforge.net/ with PyPy support☆16Jul 3, 2017Updated 9 years ago
- asyncio executors, clean and simple.☆10Nov 25, 2023Updated 2 years ago
- An R package to write logs.☆15Aug 6, 2026Updated last week
- Simply package URL based on Tauri☆11Jan 4, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A lightweight and powerful Julia package for computational pipelines and workflows.☆54Jun 4, 2026Updated 2 months ago
- mreps: software for tandem repeat identification in DNA☆15Nov 13, 2019Updated 6 years ago
- ☆15Sep 21, 2021Updated 4 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆16Dec 10, 2019Updated 6 years ago
- ggplot2 extension to add a table to an axis.☆13May 29, 2021Updated 5 years ago
- Calling R from Go and a better cli for the R console (WIP, nothing is working now)☆13Aug 19, 2020Updated 5 years ago
- A workflow assembler for cancer genome analytics and informatics☆19Nov 16, 2016Updated 9 years ago
- Winery.js: a framework for service experimentation☆22Jun 2, 2023Updated 3 years ago
- NATS Keys for Python☆19Mar 31, 2026Updated 4 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Language-agnostic Flow-based Programming (FBP) framework in Go☆66Jan 21, 2015Updated 11 years ago
- Automating Identity Access Management with Ansible☆15May 10, 2023Updated 3 years ago
- A style for equals assignment, based on the styler package☆13Apr 30, 2024Updated 2 years ago
- R package to query, list, manipulate system processes☆83Apr 30, 2026Updated 3 months ago
- A functional profiler for metagenomes using FracMinHash☆21Apr 20, 2026Updated 3 months ago
- Read Non-Rectangular Text Data☆32Nov 17, 2025Updated 9 months ago
- Graphical Display For Data Frame Output☆17Apr 9, 2025Updated last year