A pipeline framework for python
☆109Mar 27, 2026Updated 3 weeks ago
Alternatives and similar repositories for pipen
Users that are interested in pipen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of processes/pipelines for bioinformatics☆14Updated this week
- A port of liquid template engine for python☆58Oct 21, 2025Updated 5 months ago
- An R package for caching function outputs in memory (memoization)☆13Dec 9, 2025Updated 4 months ago
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 3 years ago
- WES HLA Typing based on multiple alternative tools☆18Mar 8, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A pipeline abstraction for Python☆168Feb 24, 2021Updated 5 years ago
- ☆20Jan 12, 2017Updated 9 years ago
- Python library for simple and complex indels.☆12Jan 22, 2024Updated 2 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 4 years ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- Easy ETL☆17Aug 12, 2022Updated 3 years ago
- Generalized Reporter Score-based Functional Enrichment Method for Omics Data☆87Feb 21, 2026Updated last month
- Quickly get coverage statistics given reads and an assembly☆16May 13, 2024Updated last year
- Beginning of a textbook for shell skills for bioinformatics☆11Oct 7, 2025Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆23Nov 11, 2024Updated last year
- Parakit is a tool to analyze the RCCX module, which contain the CYP21A2 gene, using long sequencing reads.☆14Apr 6, 2026Updated last week
- Kamaelia is a toolset that had the aim of making working with concurrency simple and reusable. It is now retired in favour of Guild. (Thi…☆15Aug 17, 2025Updated 8 months ago
- a simple lightweight workflow engine for data analysis scripting☆11Sep 5, 2019Updated 6 years ago
- asyncio executors, clean and simple.☆10Nov 25, 2023Updated 2 years ago
- An R package to write logs.☆15Mar 6, 2026Updated last month
- Launch a distributed R server on a cluster from a remote R session☆12Apr 23, 2022Updated 3 years ago
- mreps: software for tandem repeat identification in DNA☆15Nov 13, 2019Updated 6 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆16Dec 10, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆16Sep 21, 2021Updated 4 years ago
- 3D geoms for plotnine (grammar of graphics in Python)☆13Aug 5, 2022Updated 3 years ago
- ggplot2 extension to add a table to an axis.☆13May 29, 2021Updated 4 years ago
- A workflow assembler for cancer genome analytics and informatics☆19Nov 16, 2016Updated 9 years ago
- Calling R from Go and a better cli for the R console (WIP, nothing is working now)☆13Aug 19, 2020Updated 5 years ago
- NATS Keys for Python☆19Mar 31, 2026Updated 2 weeks ago
- Language-agnostic Flow-based Programming (FBP) framework in Go☆66Jan 21, 2015Updated 11 years ago
- ☆15Oct 10, 2023Updated 2 years ago
- R package to query, list, manipulate system processes☆84Mar 31, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Read Non-Rectangular Text Data☆32Nov 17, 2025Updated 5 months ago
- A style for equals assignment, based on the styler package☆13Apr 30, 2024Updated last year
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- Graphical Display For Data Frame Output☆17Apr 9, 2025Updated last year
- Dual listbox for Dash. Original component: https://rawgit.com/jyotirmaybanerjee/react-duallist/master/example/examples.html#☆12Aug 31, 2024Updated last year
- Enable regular expression searching of selectize object options in the R Shiny package☆19Sep 26, 2017Updated 8 years ago
- Repeated Evaluation☆17Jan 23, 2024Updated 2 years ago