olavolav / te-causalityLinks
Generalized Transfer Entropy analysis for model-free network reconstruction.
☆30Updated 4 years ago
Alternatives and similar repositories for te-causality
Users that are interested in te-causality are comparing it to the libraries listed below
Sorting:
- Code associated with the paper 'Higher-order structure of multivariate time series' (https://www.nature.com/articles/s41567-022-01852-0)☆43Updated 9 months ago
- Highly Comparative Graph Analysis - Code for network phenotyping☆47Updated last year
- A package to study complex networks based on the temporal evolution of their Dynamic Communicability and Flow.☆11Updated 11 months ago
- A Python module for detecting, analysing and visualising persistent homological features of complex networks☆30Updated 4 years ago
- ☆11Updated 6 years ago
- Partial Entropy Decomposition and Partial Information Decomposition with pointwise surprisal measures☆46Updated last year
- A package to compute and test the significance of linear dependence between multiple autocorrelated time series.☆17Updated 3 years ago
- Statistics for high-dimensional data (homogeneity, sphericity, independence, spherical uniformity)☆19Updated last year
- Pythonic implementation of the Phase Transfer Entropy method using NumPy and SciPy☆26Updated 8 months ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- Dimensionality reduction of spikes trains☆48Updated 3 years ago
- Higher-Order Interactions☆36Updated 6 months ago
- Black box variational inference for state space models☆2Updated 9 years ago
- ☆11Updated 7 years ago
- evaluate Granger Causality at multiple scales with the State Space formulation☆12Updated 2 years ago
- Python wrapper for TISEAN☆29Updated 8 years ago
- Python module for computing Symbolic Mutual Information and symbolic Transfer of Entropy☆14Updated 7 years ago
- Information Theoretic Tools for Python☆93Updated 5 years ago
- Interpretable neural spike train models with fully-Bayesian inference algorithms☆47Updated 6 years ago
- Code for "Reconstruction of plant--pollinator networks from observational data"☆20Updated 3 years ago
- Conditional probability, conditional entropy, and mutual information estimation in Python. https://arxiv.org/abs/1907.00325☆12Updated 4 years ago
- Open-Source MATLAB toolbox for transfer entropy estimation☆61Updated 7 years ago
- Matlab pipeline for simulating dynamical networks and evaluating dynamic community tracking methods, including CPM, MMM and DPPM☆13Updated 4 years ago
- Fastfit matlab toolbox☆27Updated 8 years ago
- Functions for calculating mutual information and other information theoretic quantities using a parametric Gaussian copula.☆89Updated 4 years ago
- Dynamical Components Analysis☆32Updated last year
- Copula-GP model☆17Updated last year
- Dynamical graphical models for multivariate time series data to estimate directed dynamic relationships in networks.☆25Updated 3 years ago
- Automated dynamical systems inference☆38Updated last year
- Tigramite is a time series analysis python module for linear and information-theoretic causal inference. Version 3.0 described in http://…☆33Updated 8 years ago