Alternatives and similar repositories for nireg

Users that are interested in nireg are comparing it to the libraries listed below

• neuropoly / axonseg
  Segment axon and myelin from microscopy data. Written in Matlab.
  ☆19Updated 6 years ago
• ericspod / Eidolon
  Biomedical Visualization and Analysis Framework
  ☆42Updated 2 years ago
• BioMedIA / IRTK
  The Image Registration Toolkit
  ☆83Updated 7 years ago
• stnava / ANTsTutorial
  Guide to tutorial materials for ANTs/R
  ☆47Updated 7 years ago
• bkainz / fetalReconstruction
  GPU accelerated source code for motion compensation of multi-stack MRI data
  ☆63Updated 6 years ago
• moloney / dcmstack
  DICOM to Nifti conversion with meta data preservation
  ☆77Updated last year
• uncbiag / PStrip
  PCA Model for Brain Extraction
  ☆17Updated 7 years ago
• nipy / mindboggle
  Automated anatomical brain label/shape analysis software (+ website)
  ☆154Updated 4 years ago
• BRAINSia / BRAINSTools
  A suite of tools for medical image processing focused on brain analysis
  ☆126Updated 2 months ago
• dtward / image_lddmm_tensorflow
  Image mapping using the LDDMM algorithm, implemented in tensorflow
  ☆17Updated 4 years ago
• SuperElastix / SuperElastix
  Official SuperElastix repository
  ☆88Updated 6 years ago
• kevin-keraudren / example-motion-correction
  Example code for fully automated segmentation and motion correction of the fetal brain in MRI
  ☆16Updated 9 years ago
• MarcCote / tractconverter
  Converter for different neuro-imaging file formats.
  ☆19Updated 8 years ago
• jlohmeier / atlasBREX
  atlasBREX: Automated averaged template-derived brain extraction in animal MRI
  ☆17Updated 2 years ago
• NiftyPET / NiftyPET
  High-throughput Python platform for image reconstruction and analysis
  ☆50Updated 6 months ago
• ofgulban / segmentator
  3D MRI data exploration and segmentation tool.
  ☆77Updated 2 years ago
• ASETS / asetsMatlabMaxFlow
  Matlab implementation of continuous max flow variants
  ☆21Updated 9 years ago
• jeffduda / NeuroBattery
  Using ANTs to process multiple MR image types for a single subject
  ☆26Updated 8 years ago
• rkwitt / quicksilver
  Predictive Image Registration
  ☆140Updated 7 years ago
• almarklein / pyelastix
  Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images
  ☆109Updated 5 years ago
• lassoan / SlicerElastix
  This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.
  ☆56Updated 5 months ago
• tanguyduval / imtool3D_td
  3D Image Viewer with ROI tools for Matlab ( NIFTI viewer, Manual segmentation )
  ☆48Updated last year
• nipy / nilabels
  Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.
  ☆22Updated 8 months ago
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆167Updated last week
• UCL / PETPVC
  Partial Volume Correction in PET
  ☆66Updated last year
• dipy / cudipy
  cupy-accelerated DIPY
  ☆11Updated 4 years ago
• spedemon / Occiput
  Tomographic vision
  ☆43Updated 7 years ago
• nipreps / fmriprep-rodents
  fMRIPrep for Rodents
  ☆13Updated 2 years ago
• balbasty / nitorch
  Neuroimaging in PyTorch
  ☆100Updated last week
• physimals / quantiphyse
  Application for analysis and modelling of volumetric medical imaging data
  ☆30Updated last year