junwoopark92 / mimic-sparql
"Knowledge Graph-based Question Answering with Electronic Health Records", accepted at Machine Learning for Health Care (MLHC) 2021
☆32Updated last year
Alternatives and similar repositories for mimic-sparql:
Users that are interested in mimic-sparql are comparing it to the libraries listed below
- DescEmb - Unifying Heterogenous Electronic Health Records Systems via Text-Based Code Embedding☆20Updated 10 months ago
- [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"☆29Updated last month
- UniHPF : Universal Healthcare Predictive Framework with Zero Domain Knowledge☆12Updated last year
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆12Updated 6 months ago
- [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records☆75Updated 2 months ago
- ☆14Updated 6 months ago
- Code for the paper "Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset" (ACL 2020)☆17Updated 4 years ago
- Source codes of the paper "Hierarchical Pretraining on Multimodal Electronic Health Records".☆16Updated 10 months ago
- ☆22Updated 3 years ago
- EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images, NeurIPS 2023 D&B☆69Updated 6 months ago
- Clinical NLP Shared Task @ NAACL'24☆28Updated last month
- Dataset for Checking Consistency between Unstructured Notes and Structured Tables in Electronic Health Records☆18Updated 5 months ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆55Updated last year
- REMed: Retrieval-Enhanced Medical prediction model☆15Updated last month
- ☆9Updated 2 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆91Updated 6 months ago
- Source code for ACL 2021 paper "Automatic ICD Coding via Interactive Shared Representation Networks with Self-distillation Mechanism"☆14Updated 3 years ago
- [ACL 2024] This is the code for our paper ”RAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Records“.☆27Updated 5 months ago
- Dataset and Evaluation Code for the K-QA Benchmark.☆14Updated 8 months ago
- Official repository of FactKG☆55Updated last week
- Code repository for the paper : Causal thinking for decision making on Electronic Health Records: why and how☆15Updated last year
- CliniQG4QA: Generating Diverse Questions for Domain Adaptation of Clinical Question Answering☆21Updated 3 years ago
- ☆17Updated 2 years ago
- [ACL 2024 Findings] This is the code for our paper "Knowledge-Infused Prompting: Assessing and Advancing Clinical Text Data Generation wi…☆38Updated 7 months ago
- Learning from Negative samples for Biomedical Generative Entity Linking☆17Updated 5 months ago
- EMNLP'22 | PromptEHR: Conditional Electronic Healthcare Records Generation with Prompt Learning☆28Updated last year
- ☆25Updated last year
- Clinically Adapted Model Enhanced from LLaMA☆81Updated last year
- Official Code Repository for the paper "KALA: Knowledge-Augmented Language Model Adaptation" (NAACL 2022)☆36Updated last year
- MEDIQA-Chat Shared Tasks @ ACL-ClinicalNLP 2023☆48Updated last year