Alternatives and similar repositories for mimic-sparql

Users that are interested in mimic-sparql are comparing it to the libraries listed below

• ji-youn-kim / EHRNoteQA
  [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"
  ☆37Updated last year
• hoon9405 / DescEmb
  DescEmb - Unifying Heterogenous Electronic Health Records Systems via Text-Based Code Embedding
  ☆22Updated 8 months ago
• stefanhgm / patient_summaries_with_llms
  Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"
  ☆17Updated 5 months ago
• tongzhou21 / ISD
  Source code for ACL 2021 paper "Automatic ICD Coding via Interactive Shared Representation Networks with Self-distillation Mechanism"
  ☆14Updated 4 years ago
• emnlp-mimic / mimic
  ☆21Updated 4 years ago
• dmis-lab / BioLAMA
  EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?
  ☆57Updated 2 years ago
• hoon9405 / UniHPF
  UniHPF : Universal Healthcare Predictive Framework with Zero Domain Knowledge
  ☆13Updated 2 years ago
• lujiaying / Awesome-HealthCare-KnowledgeBase
  A curated list of awesome healthcare taxonomies and knowledge graphs.
  ☆74Updated last year
• starmpcc / CAMEL
  Clinically Adapted Model Enhanced from LLaMA
  ☆89Updated 2 years ago
• ritaranx / ClinGen
  [ACL 2024 Findings] This is the code for our paper "Knowledge-Infused Prompting: Assessing and Advancing Clinical Text Data Generation wi…
  ☆40Updated last year
• glee4810 / EHRSQL
  [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records
  ☆100Updated last year
• ratschlab / mmugl
  Code repository for MMUGL: Multi-modal Graph Learning over UMLS Knowledge Graphs
  ☆11Updated 2 years ago
• jiho283 / FactKG
  Official repository of FactKG
  ☆58Updated 8 months ago
• yiqingxyq / DocLens
  Code for "DocLens: Multi-aspect Fine-grained Evaluation for Medical Text Generation" (ACL 2024)
  ☆21Updated last year
• zhao-zy15 / PMC-Patients
  PMC-Patients
  ☆102Updated last year
• bvanaken / clinical-outcome-prediction
  Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
  ☆98Updated last year
• xiangyue9607 / CliniRC
  Code for the paper "Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset" (ACL 2020)
  ☆17Updated 5 years ago
• Andy-jqa / biomedical-qa-datasets
  Biomedical Question Answering Datasets.
  ☆122Updated 8 months ago
• sunlab-osu / CliniQG4QA
  CliniQG4QA: Generating Diverse Questions for Domain Adaptation of Clinical Question Answering
  ☆23Updated 4 years ago
• pat-jj / KARE
  [ICLR'25] Reasoning-Enhanced Healthcare Predictions with Knowledge Graph Community Retrieval
  ☆51Updated 9 months ago
• XiaochenWang-PSU / MedHMP
  Source codes of the paper "Hierarchical Pretraining on Multimodal Electronic Health Records".
  ☆20Updated last year
• jshang123 / G-Bert
  Pre-training of Graph Augmented Transformers for Medication Recommendation
  ☆126Updated 6 years ago
• elehman16 / discq
  ☆18Updated 3 years ago
• mila-iqia / ddxplus
  ☆99Updated 5 months ago
• whaleloops / KEPT
  auto icd coding with prompt
  ☆49Updated last year
• starmpcc / REMed
  REMed: Retrieval-Enhanced Medical prediction model
  ☆22Updated last year
• ritaranx / RAM-EHR
  [ACL 2024] This is the code for our paper ”RAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Records“.
  ☆40Updated last year
• foxlf823 / Multi-Filter-Residual-Convolutional-Neural-Network
  Multi-Filter Residual Convolutional Neural Network for Text Classification
  ☆50Updated 4 years ago
• abachaa / MEDIQA-Chat-2023
  MEDIQA-Chat Shared Tasks @ ACL-ClinicalNLP 2023
  ☆53Updated 2 years ago
• qingyu-qc / gpt_bionlp_benchmark
  ☆25Updated 2 years ago