tong-wu-umn / ME2Vec
Source code of ME2Vec.
☆14Updated last year
Alternatives and similar repositories for ME2Vec:
Users that are interested in ME2Vec are comparing it to the libraries listed below
- ☆37Updated 11 months ago
- Readmission Prediction via Deep Contextual Embedding of Clinical Concepts☆18Updated 7 years ago
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆14Updated 2 years ago
- Corresponding code for experiments described in "Predicting Clinical Outcomes Across Changing Electronic Health Records." Presented at KD…☆11Updated 7 years ago
- R package for delineating temporal dataset shifts in Eletronic Health Records☆17Updated 11 months ago
- ☆29Updated 3 years ago
- Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction☆32Updated 5 years ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆29Updated 7 years ago
- ☆33Updated 6 years ago
- EHR2Vec is a embedding translation tool for medical entities based on attention mechanism. We have provided a version of tensorflow imple…☆13Updated 4 years ago
- ☆30Updated 7 years ago
- Embedding Complexity In the Data Representation Instead of In the Model (arXiv:1802.04233)☆24Updated 7 years ago
- An R package for evaluating phenotype algorithms.☆17Updated 6 months ago
- ☆39Updated 3 years ago
- AMIA submission examining note-derived vector representations☆10Updated 2 years ago
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 4 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆92Updated 9 months ago
- This is the source code for the paper 'Analysis and Prediction of Unplanned Intensive Care Unit Readmission'☆31Updated 6 years ago
- Patient Code & Text Representation Learning☆20Updated last year
- Evaluating the reproducibility of mortality prediction studies in the MIMIC-III database☆38Updated 7 years ago
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆38Updated 3 months ago
- ☆53Updated 5 years ago
- ACT COVID Ontology☆15Updated 3 years ago
- A python package for removing duplicate text in clinical notes or other documents☆36Updated 4 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- ICML 2018: "Adversarial Time-to-Event Modeling"☆37Updated 6 years ago
- ☆12Updated 3 years ago
- Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records☆20Updated 2 years ago
- Jupyter Notebooks and other code for 4CE data visualizations.☆13Updated 2 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 5 years ago