Alternatives and similar repositories for scripts

Users that are interested in scripts are comparing it to the libraries listed below

• neurospin / pypreclin
  ☆13Updated 5 years ago
• BrainModes / TVB-empirical-data-pipeline
  Empirical processing pipeline for The Virtual Brain
  ☆24Updated 6 years ago
• NSBLab / BrainEigenmodes
  Code supporting 'Geometric constraints on human brain function'
  ☆109Updated 8 months ago
• neurabenn / precon_all
  precon_all surface pipline
  ☆29Updated 6 months ago
• bids-apps / rsHRF
  Resting state HRF estimation from BOLD-fMRI signal
  ☆39Updated 4 months ago
• rudyvdbrink / Surface_projection
  Code for projecting volumetric nifti files to HCP surface and Glasser atlas parcel-wise value extraction
  ☆13Updated 2 years ago
• LewisNeuro / HRAN
  We created a model to remove physiological noise in fast fMRI without external reference signals.
  ☆12Updated 6 years ago
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆49Updated 6 months ago
• bids-apps / MRtrix3_connectome
  Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…
  ☆54Updated last week
• Macatools / macapype
  PNH segmentation pipelines based on nipype
  ☆24Updated last month
• the-virtual-brain / tvb-multiscale
  Integration between TVB and NEST, for multiscale (co)simulations .
  ☆41Updated last week
• breakspear / bdtoolkit
  The Brain Dynamics Toolbox
  ☆36Updated 5 years ago
• HBClab / NiBetaSeries
  Nipype implementation of BetaSeries Correlations (Beta)
  ☆35Updated 2 years ago
• ColeLab / ColeAnticevicNetPartition
  Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)
  ☆82Updated 4 years ago
• neurolabusc / fsl_sub
  parallel FSL processing without requiring SGE
  ☆27Updated 4 years ago
• MIPLabCH / nigsp
  NiGSP: a module for graph signal processing on neuroimaging data
  ☆21Updated 2 weeks ago
• tsb46 / BOLD_WAVES
  Quantifying and describing blood-oxygen-level dependent (BOLD) spatial propagation activity
  ☆26Updated 2 years ago
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆56Updated last year
• caseypaquola / BigBrainWarp
  BigBrainWarp
  ☆26Updated 5 months ago
• TingsterX / alignment_macaque-human
  cross-species alignment (joint-embedding between human and macaque)
  ☆30Updated 4 years ago
• alfnie / conn
  CONN toolbox, development version (conn-toolbox.org)
  ☆49Updated 2 weeks ago
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 5 years ago
• inm7 / cbptools
  CBPtools: A Python package for regional connectivity-based parcellation
  ☆21Updated last year
• suyashdb / hcp2bids
  To convert Human Connectome projects(HCP) data to BIDS std
  ☆31Updated 3 years ago
• OHBA-analysis / osl-dynamics
  Methods for studying dynamic functional brain activity in neuroimaging data.
  ☆77Updated this week
• khanlab / hippunfold
  BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
  ☆63Updated 2 weeks ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆43Updated last year
• Remi-Gau / online_neuroimaging_resources
  a laundry list of resources for MRI, fMRI, EEG, MEG...
  ☆36Updated 3 years ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆87Updated this week
• dutchconnectomelab / CATO
  Toolbox for structural and functional brain connectivity reconstruction.
  ☆18Updated last year