An implementation of the circular layout algorithm by Dogrusoz et al. as a Cytoscape.js extension
☆36Jul 8, 2025Updated last year
Alternatives and similar repositories for cytoscape.js-cise
Users that are interested in cytoscape.js-cise are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A web application to visualize and edit the pathway models represented by SBGN Process Description Notation☆16Jun 24, 2026Updated last month
- Miscellaneous utilities for placement of nodes or components complementary to a main layout algorithm☆18Dec 24, 2025Updated 7 months ago
- A web application to visualize and edit pathway models☆62Updated this week
- A Cytoscape.js extension to import from and export to GraphML format☆32Mar 19, 2025Updated last year
- A web based visualization tool for process description maps in SBGN☆35May 5, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A Cytoscape.js extension enabling interactive editing of edge anchor (bend or control) points☆47Jun 26, 2026Updated last month
- fCoSE: a fast Compound Spring Embedder☆179Apr 17, 2026Updated 3 months ago
- A plugin for cytoscape.js that allows a user to create a custom toolbar to add next to a cytoscape core instance.☆19Apr 4, 2016Updated 10 years ago
- The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.☆137Mar 4, 2026Updated 4 months ago
- WikiPathways Database☆16Updated this week
- Core module for compound spring embedder based layout styles☆11May 5, 2026Updated 2 months ago
- PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways☆62Mar 18, 2024Updated 2 years ago
- ☆12Oct 10, 2024Updated last year
- Bird's eye view pan and zoom control for Cytoscape.js.☆70Mar 13, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Formation continue sur la FAIRisation du code informatique☆10Jun 15, 2022Updated 4 years ago
- Context menu for Cytoscape.js☆180Apr 10, 2026Updated 3 months ago
- Graph visualization and exploration software. Leverages cytoscape.js and provides rich and customized graph visualizations. Aims ultimate…☆16Feb 11, 2023Updated 3 years ago
- ☆45Mar 10, 2023Updated 3 years ago
- Sequence data label generation and ingestion into deep learning models☆12Nov 17, 2021Updated 4 years ago
- scripts used to analyse horizontal transfer and evolution of transposable elements in 307 vertebrate species☆11May 16, 2021Updated 5 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 5 years ago
- ☆23Dec 25, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Joint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.☆10Jul 9, 2026Updated 2 weeks ago
- Compiler for a toy language (Lex & Yacc)☆15Dec 7, 2014Updated 11 years ago
- Curated list of resources for variant prioritization☆15Nov 18, 2025Updated 8 months ago
- Single Cell RNA-seq UMI Filtering Facilitator☆10Oct 6, 2025Updated 9 months ago
- Automated pipeline for amplicon sequence analysis☆11Nov 25, 2025Updated 8 months ago
- Flask app with D3 integration.☆10Feb 27, 2015Updated 11 years ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 9 months ago
- Modeling and Analysis of (Statistical) Genetics data in python☆20Jul 4, 2026Updated 3 weeks ago
- Cytoscape.js tutorials project for GSOC 2016☆14Jan 11, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Functions to extract and interact with data from the Scottish Health and Social Care Open Data platform.☆12Jul 17, 2026Updated last week
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Oct 25, 2021Updated 4 years ago
- Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.☆11Mar 27, 2020Updated 6 years ago
- Compute a 2D embedding of a data matrix given supervised class information.☆12Dec 8, 2019Updated 6 years ago
- An R interface to the MEME Suite☆54Jan 7, 2026Updated 6 months ago
- Time series classification on a hue histogram using kNN and Euclidean distance☆11Oct 15, 2015Updated 10 years ago
- Software for the analysis and visualization of site-saturation mutagenesis experiments☆19Apr 21, 2023Updated 3 years ago