hsidky / srvLinks
☆14Updated 5 years ago
Alternatives and similar repositories for srv
Users that are interested in srv are comparing it to the libraries listed below
Sorting:
- Supporting data for the manuscript "Deep learning the slow modes for rare events sampling"☆21Updated last year
- Enhanced sampling methods for molecular dynamics simulations☆39Updated 2 years ago
- Equivariant GNN for the prediction of atomic multipoles up to quadrupoles.☆30Updated 3 years ago
- Example to fit parameters and run CG simulations using TorchMD and Schnet☆48Updated 3 years ago
- Learning neural network potentials from experimental data via Differentiable Trajectory Reweighting☆34Updated last year
- Spectral Gap Optimization of Parameters☆18Updated 5 years ago
- learning coarse-grained force fields☆63Updated 3 years ago
- A Python library for constructing polymer topologies and coordinates☆16Updated 2 weeks ago
- Implementation of Differentiable Molecular Simulations with torchMD.☆15Updated 2 years ago
- N-Dimensional MD engine with symmetry group constraints written in C☆50Updated last year
- an interface to semi-empirical quantum chemistry methods implemented with pytorch☆55Updated this week
- Source code and input files associated to the paper "Targeted free energy perturbation revisited: Accurate free energies from mapped refe…☆13Updated 4 years ago
- A simple implementation of replica exchange MD simulations for OpenMM.☆23Updated 4 years ago
- A Newtonian message passing network for deep learning of interatomic potentials and forces☆45Updated 3 months ago
- Reweighted Autoencoded Variational Bayes for Enhanced Sampling (RAVE)☆44Updated 5 years ago
- MLP training for molecular systems☆54Updated 3 weeks ago
- A universal ML model to predict molecular dynamics trajectories with long time steps☆23Updated 3 months ago
- GraphVAMPnets combines graph neural networks with variational approach for Markovian process (VAMP) theory to identify the slow collectiv…☆12Updated last year
- ☆17Updated 11 months ago
- Get access to our MD data files.☆29Updated last year
- Force-field-enhanced Neural Networks optimized library☆59Updated last week
- Accelerated sampling framework with autoencoder-based method☆23Updated 6 years ago
- Automated reaction discovery and dataset generation with the growing string method☆20Updated 5 years ago
- ☆61Updated last month
- ☆40Updated 2 weeks ago
- Training Neural Network potentials through customizable routines in JAX.☆51Updated 2 months ago
- Absolute solvation free energy calculations with OpenFF and OpenMM☆25Updated 10 months ago
- Collective variables by artificial neural networks☆10Updated 3 years ago
- Transferable Double Exponential non-bonded potential for condensed phase simulations of small molecules☆23Updated 3 weeks ago
- Code for performing adversarial attacks on atomistic systems using NN potentials☆40Updated 3 years ago