hsidky / srvLinks
☆14Updated 5 years ago
Alternatives and similar repositories for srv
Users that are interested in srv are comparing it to the libraries listed below
Sorting:
- Supporting data for the manuscript "Deep learning the slow modes for rare events sampling"☆20Updated last year
- Enhanced sampling methods for molecular dynamics simulations☆37Updated 2 years ago
- Equivariant GNN for the prediction of atomic multipoles up to quadrupoles.☆30Updated 3 years ago
- Implementation of Differentiable Molecular Simulations with torchMD.☆15Updated last year
- Example to fit parameters and run CG simulations using TorchMD and Schnet☆46Updated 3 years ago
- Spectral Gap Optimization of Parameters☆18Updated 5 years ago
- Learning neural network potentials from experimental data via Differentiable Trajectory Reweighting☆31Updated last year
- GraphVAMPnets combines graph neural networks with variational approach for Markovian process (VAMP) theory to identify the slow collectiv…☆11Updated last year
- Source code and input files associated to the paper "Targeted free energy perturbation revisited: Accurate free energies from mapped refe…☆13Updated 3 years ago
- Get access to our MD data files.☆29Updated last year
- A Newtonian message passing network for deep learning of interatomic potentials and forces☆44Updated last month
- Reweighted Autoencoded Variational Bayes for Enhanced Sampling (RAVE)☆43Updated 5 years ago
- Training Neural Network potentials through customizable routines in JAX.☆36Updated last month
- Force-field-enhanced Neural Networks optimized library☆57Updated last week
- MLP training for molecular systems☆49Updated last week
- Supplementary Data for "A graph representation of molecular ensembles for polymer property prediction"☆20Updated 2 years ago
- Utilities for molecular volume calculation☆11Updated 7 years ago
- Accelerated sampling framework with autoencoder-based method☆23Updated 5 years ago
- A fast solver for large scale MBAR/UWHAM equations☆39Updated 10 months ago
- Transferable Double Exponential non-bonded potential for condensed phase simulations of small molecules☆22Updated 11 months ago
- A simple implementation of replica exchange MD simulations for OpenMM.☆24Updated 3 years ago
- ASH is a Python-based computational chemistry and QM/MM environment, primarily for molecular calculations in the gas phase, explicit sol…☆73Updated last week
- N-Dimensional MD engine with symmetry group constraints written in C☆48Updated 11 months ago
- ☆59Updated 2 months ago
- Machine learning interatomic potential for condensed-phase reactive chemistry☆20Updated last year
- ☆33Updated 3 weeks ago
- Automated reaction discovery and dataset generation with the growing string method☆20Updated 5 years ago
- Collective variables by artificial neural networks☆9Updated 3 years ago
- This repo contains the datasets used for the paper The Design Space of E(3)-Equivariant Atom-Centered Interatomic Potentials.☆18Updated 2 years ago
- Introductory tutorial on TPS, committor analysis, and (MS)TIS with OpenPathSampling☆15Updated last year