This repository contains the code for UNETR: Transformers for 3D Medical Image Segmentation [1]. UNETR is the first 3D segmentation network that uses a pure vision transformer as its encoder without relying on CNNs for feature extraction. The code presents a volumetric (3D) multi-organ segmentation application using the BTCV challenge dataset.
☆16Jul 8, 2022Updated 4 years ago
Alternatives and similar repositories for UNETR-pytorch
Users that are interested in UNETR-pytorch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official respository of MIA 2023 paper: Contour-aware network with class-wise convolutions for 3D abdominal multi-organ segmentation☆11May 15, 2023Updated 3 years ago
- QTSeg: A Query Token-Based Architecture for Efficient 2D Medical Image Segmentation☆12Feb 28, 2025Updated last year
- This repository contains the source code of our proposed multimodal image segmentation frameworks. The network architectures and training…☆22Sep 18, 2025Updated 10 months ago
- The official implementation of the paper: [ProCNS: Progressive Prototype Calibration and Noise Suppression for Weakly-Supervised Medical …☆17May 18, 2025Updated last year
- This repository hosts the code of the research presented in ECCV 2024 "CoLA: Conditional Dropout and Language-driven Robust Dual-modal Sa…☆18Dec 5, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Source-free unsupervised domain adaptation for cross-modality abdominal multi-organ segmentation☆16Mar 19, 2023Updated 3 years ago
- ☆12Dec 6, 2024Updated last year
- NoSQL-based (MongoDB) medical image archive for managing the DICOM images (i.e. miniPACS).☆13Nov 15, 2024Updated last year
- ☆25Sep 15, 2023Updated 2 years ago
- Perform Canny edge detection in 3D in python.☆16Apr 18, 2023Updated 3 years ago
- MultiResDenseUNet (SVOISP-2021-KH&KTMT-125) - Winner (3rd Prize) of The 10th Science and Technology Symposium for OISP Students. Ho Chi M…☆16Oct 17, 2023Updated 2 years ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆37Mar 24, 2020Updated 6 years ago
- This is a nnUNet for semi-supervised☆26Sep 23, 2022Updated 3 years ago
- [MICCAI2023] XSurv: Merging-Diverging Hybrid Transformer Networks for Survival Prediction☆12Oct 2, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆15Apr 29, 2024Updated 2 years ago
- PyTorch implementation of the two U-Net-based architectures described in "Deep Learning for Segmentation using an Open Large-Scale Datase…☆16Nov 17, 2022Updated 3 years ago
- This repository for Liver and Tumor Segmentation(LiTS2017)☆12Jul 26, 2020Updated 6 years ago
- The public brain 3D vessel datasets, include TubeTK and MIDAS.☆45Nov 16, 2021Updated 4 years ago
- Code for IJCAI 2023 paper 'SLViT: Scale-Wise Language-Guided Vision Transformer for Referring Image Segmentation'☆11May 28, 2023Updated 3 years ago
- ☆15Jun 27, 2026Updated last month
- 基于SwinUNet论文复现☆22Oct 25, 2022Updated 3 years ago
- Musculoskeletal Analysis extension for 3D Slicer. Currently has cortical, cancellous, and bone density analysis.☆13May 2, 2024Updated 2 years ago
- LHU-Net: A Lean Hybrid U-Net for Cost-efficient, High-performance Volumetric Medical Image Segmentation☆67Jan 30, 2026Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- [ACM-MM'24 Oral] PASSION: Towards Effective Incomplete Multi-Modal Medical Image Segmentation with Imbalanced Missing Rates☆35Jun 4, 2025Updated last year
- ☆15Sep 23, 2022Updated 3 years ago
- The codes and dataset for the semantic explainable AI (S-XAI)☆16Feb 23, 2023Updated 3 years ago
- ☆14Jun 25, 2024Updated 2 years ago
- ☆22Jul 30, 2024Updated 2 years ago
- [MICCAI 2023] MDViT: Multi-domain Vision Transformer for Small Medical Image Segmentation Datasets (an official implementation)☆41Jan 12, 2024Updated 2 years ago
- ☆10Nov 26, 2023Updated 2 years ago
- MedIA 2025 | A-Eval: A Benchmark for Cross-Dataset and Cross-Modality Evaluation of Abdominal Multi-Organ Segmentation☆34Feb 17, 2025Updated last year
- Curated resource accompanying our systematic review of intermediate fusion in multimodal deep learning for biomedical applications (IVC 2…☆15Feb 28, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Diff-UNet: A Diffusion Embedded Network for Volumetric Segmentation. (using diffusion for 3D medical image segmentation)☆196Mar 22, 2024Updated 2 years ago
- [ICCV 2025 Oral] RePoseD: Efficient Relative Pose Estimation With Known Depth Information☆34Jan 12, 2026Updated 6 months ago
- Source code of SFusion☆26Mar 5, 2023Updated 3 years ago
- ☆15Feb 27, 2020Updated 6 years ago
- [NeurIPS 2025] Revisiting End-to-End Learning with Slide-level Supervision in Computational Pathology☆35Oct 20, 2025Updated 9 months ago
- ☆28Mar 5, 2023Updated 3 years ago
- [NeurIPS 2024] Upping the Game: How 2D U-Net Skip Connection Flipping 3D Segmentation☆22Apr 12, 2025Updated last year