coderxio / sagerxLinks
Open drug data pipelines curated by pharmacists.
☆64Updated last week
Alternatives and similar repositories for sagerx
Users that are interested in sagerx are comparing it to the libraries listed below
Sorting:
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆45Updated 3 weeks ago
- drgpy is a Python library for assigning a combination of diagnosis and procedure codes to Diagnosis Related Groups (MS-DRG) that is used …☆57Updated last year
- A tool to help improve data quality standards in observational data science.☆164Updated 6 months ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆37Updated last year
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆45Updated last month
- A package of clinically validated score calculations designed for easy integration into proprietary software systems.☆29Updated 2 months ago
- Main repo including core data model, data marts, data quality tests, and terminology sets.☆266Updated this week
- FHIR Python Analysis Client and Kit (FHIRPACK) is a general purpose FHIR client that simplifies the access, analysis and representation o…☆48Updated 2 years ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆113Updated 4 months ago
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆29Updated 2 weeks ago
- A starter dbt project and synthetic claims dataset for trying out the Tuva Project.☆25Updated 3 weeks ago
- Connector that loads FHIR r4 USCDIv3 JSON data from local file storage into the Tuva common data model in Snowflake.☆27Updated last month
- An ASGI FHIR API framework built on top of FastAPI and FHIR Resources☆39Updated last week
- A Python implementation of the tools from H-CUP (Healthcare Cost and Utilization Project)☆65Updated 2 years ago
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- Improving Public Access to Aggregate Content of ClinicalTrials.gov☆149Updated last month
- ☆27Updated 7 years ago
- A Python implementation of Hierarchical Condition Categories☆105Updated 7 months ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆98Updated last year
- Course materials for OHDSI ETL tutorial☆48Updated 8 months ago
- Transform the OMOP model to graph model☆22Updated 7 months ago
- WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an E…☆193Updated 3 months ago
- The missing middleware layer in healthcare AI 💫 🏥☆37Updated 3 weeks ago
- Loads CSV records from file, and maps them to FHIR resources.☆17Updated 5 months ago
- Oncology Working Group Repository☆57Updated 3 weeks ago
- FHIR to pandas dataframe for data analytics, AI and ML!☆38Updated 2 weeks ago
- Mapping U.S. FDA National Drug Codes (NDC) to Drug Classes and Codes☆101Updated 11 months ago
- The Book of OHDSI repository☆120Updated 10 months ago
- HEDIS FHIR-based Quality Reporting☆29Updated 5 years ago