Alternatives and similar repositories for RareBench:

Users that are interested in RareBench are comparing it to the libraries listed below

• ncbi / MedCPT
  Code for MedCPT, a model for zero-shot biomedical information retrieval.
  ☆159Updated 10 months ago
• Andy-jqa / biomedical-qa-datasets
  Biomedical Question Answering Datasets.
  ☆93Updated last year
• wshi83 / EhrAgent
  [EMNLP'24] EHRAgent: Code Empowers Large Language Models for Complex Tabular Reasoning on Electronic Health Records
  ☆78Updated last month
• paulhager / MIMIC-Clinical-Decision-Making-Dataset
  Code repository to create the MIMIC-CDM Dataset.
  ☆26Updated 2 weeks ago
• lujiaying / Awesome-HealthCare-KnowledgeBase
  A curated list of awesome healthcare taxonomies and knowledge graphs.
  ☆69Updated 10 months ago
• stefanhgm / patient_summaries_with_llms
  Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"
  ☆12Updated 6 months ago
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆27Updated 10 months ago
• pmc-patients / pmc-patients
  PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…
  ☆61Updated last year
• qingyu-qc / gpt_bionlp_benchmark
  ☆25Updated last year
• dmis-lab / self-biorag
  ISMB'24 "Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models"
  ☆48Updated 10 months ago
• mitmedialab / MDAgents
  Official implementation for NeurIPS'24 paper: MDAgents: An Adaptive Collaboration of LLMs for Medical Decision-Making
  ☆112Updated 3 months ago
• whaleloops / KEPT
  auto icd coding with prompt
  ☆48Updated 9 months ago
• ji-youn-kim / EHRNoteQA
  [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"
  ☆29Updated last month
• Teddy-XiongGZ / MIRAGE
  Official repository of the MIRAGE benchmark
  ☆116Updated 3 months ago
• ritaranx / ClinGen
  [ACL 2024 Findings] This is the code for our paper "Knowledge-Infused Prompting: Assessing and Advancing Clinical Text Data Generation wi…
  ☆38Updated 7 months ago
• BIDS-Xu-Lab / Me-LLaMA
  A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks
  ☆138Updated last month
• zhao-zy15 / PMC-Patients
  PMC-Patients
  ☆92Updated 8 months ago
• ncbi-nlp / TrialGPT
  Code and data for TrialGPT.
  ☆73Updated 3 weeks ago
• Itaymanes / K-QA
  Dataset and Evaluation Code for the K-QA Benchmark.
  ☆14Updated 8 months ago
• ncbi-nlp / MedCalc-Bench
  [NeurIPS 2024 Datasets and Benchmark Track Oral] MedCalc-Bench: Evaluating Large Language Models for Medical Calculations
  ☆43Updated last month
• HanjieChen / ChallengeClinicalQA
  Repo for the pape Benchmarking Large Language Models on Answering and Explaining Challenging Medical Questions
  ☆27Updated 6 months ago
• ritaranx / RAM-EHR
  [ACL 2024] This is the code for our paper ”RAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Records“.
  ☆27Updated 5 months ago
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆79Updated 2 years ago
• medmcqa / medmcqa
  A large-scale (194k), Multiple-Choice Question Answering (MCQA) dataset designed to address realworld medical entrance exam questions.
  ☆184Updated 2 years ago
• Teddy-XiongGZ / MedRAG
  Code for the MedRAG toolkit
  ☆262Updated 2 months ago
• RyanWangZf / BioBridge
  ICLR'24 | BioBridge: Bridging Biomedical Foundation Models via Knowledge Graphs
  ☆65Updated 9 months ago
• KaiHe-better / LLM-for-Healthcare
  ☆122Updated 8 months ago
• RyanWangZf / PyTrial
  PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development
  ☆92Updated last year
• chufangao / CTOD
  Code for CTO: A Large Clinical Trial Outcome and QA Dataset
  ☆21Updated last week
• som-shahlab / ehrshot-benchmark
  A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
  ☆151Updated this week