A parallelized implementation of Principal Component Analysis (PCA) using Singular Value Decomposition (SVD) in OpenMP for C. The procedure used is Modified Gram Schmidt algorithm. The method for Classical Gram Schmidt is also available for use.
☆18May 9, 2019Updated 7 years ago
Alternatives and similar repositories for parallel-PCA-openmp
Users that are interested in parallel-PCA-openmp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Realtime feedback of Akka Stream processing via WebSockets☆16Dec 9, 2019Updated 6 years ago
- This repository contains a rough GLSL implementation of "Deep Hybrid Order-Independent Transparency" by G. Tsopouridis, A. A. Vasilakis a…☆10Apr 16, 2024Updated 2 years ago
- n-body-simulation performance test suite☆18Jun 19, 2023Updated 3 years ago
- Collection of single header libraries I've written. C++ dynamic array and hashmap, runtime and compile time hashing functions, and a .ply…☆11Oct 5, 2026Updated 3 weeks ago
- R Bindings for htslib/bcf☆10Oct 4, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Find bubbles in the Colored de Bruijn Graph to reconstruct phylogenetic trees☆13Mar 26, 2019Updated 7 years ago
- screening metagenomes for arbitrary lineages, using gene-centric assembly methods and phylogenetics☆10Oct 29, 2020Updated 6 years ago
- Fast Linear Regression in C☆11Oct 19, 2019Updated 7 years ago
- Scripts for normalizing coverage in samples with highly amplified regions☆10Jan 19, 2021Updated 5 years ago
- Testing hybridization using species trees☆10Aug 25, 2017Updated 9 years ago
- A tool for typing SCCmec cassettes in assemblies☆14Aug 25, 2024Updated 2 years ago
- CREST - Classification Resources for Environmnetal Sequence Tags, is a collection of software and databases for taxonomic classification …☆12Mar 20, 2022Updated 4 years ago
- Simple and fast MinHash implementation in C with Python wrapper☆13Jul 24, 2025Updated last year
- Basic path tracing with WebGPU.☆10Jul 4, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A fast and efficient short read mapper☆13Nov 7, 2021Updated 4 years ago
- Tools for analyzing and comparing SARS-CoV-2 phylogenies☆10Nov 21, 2020Updated 5 years ago
- Lists of pre-defined macros for various C/C++ compilers☆19Nov 15, 2019Updated 6 years ago
- Personal Development on Fast Artificial Neural Network Library☆12Nov 26, 2013Updated 12 years ago
- Screening Historical Events of Recombination in a Phylogeny via Ancestral Sequences☆11Sep 3, 2025Updated last year
- Masks recombinant regions in an alignment based on ClonalFrameML output☆10May 18, 2018Updated 8 years ago
- Phylogenetic Clustering (Phyloclustering)☆10Sep 6, 2023Updated 3 years ago
- Tool for visualising viral lineages in space and time. As seen on covid19.sanger.ac.uk and covglobe.org.☆10Jul 22, 2022Updated 4 years ago
- this software is not supported anymore. please visit https://github.com/moldyn/FastPCA for the current version.☆13Aug 22, 2017Updated 9 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A tool to filter BUSCO output into single-copy gene files for phylogenomics☆13Jul 24, 2024Updated 2 years ago
- Python and C/C++ library for fast, accurate PCA on the GPU☆12Jun 4, 2018Updated 8 years ago
- SOPanG, a simple tool for pattern matching over an elastic-degenerate string, a recently proposed simplified model for the pan-genome.☆10Apr 16, 2020Updated 6 years ago
- A reference implementation of logistic regression in C☆14Feb 2, 2015Updated 11 years ago
- ☆17Jan 6, 2023Updated 3 years ago
- PAGAN2 multiple sequence aligner☆12Sep 4, 2026Updated last month
- Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array☆10Mar 7, 2024Updated 2 years ago
- gRPC server for hnswlib☆16Mar 6, 2023Updated 3 years ago
- 记录含较长代码块,在石墨上不方便显示的工具笔记,充当索引使用☆10Sep 3, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A multi-algorithmic framework for phylogenetic inference☆14Updated this week
- Zobrist hashing in C☆17Sep 15, 2016Updated 10 years ago
- ☆10Nov 6, 2020Updated 5 years ago
- Fast, parallelized implementation of Principal Component Analysis with constant memory consumption for large data sets.☆12Feb 18, 2022Updated 4 years ago
- ☆11May 30, 2023Updated 3 years ago
- SPecies level IdentificatioN of metaGenOmic amplicons☆11Apr 11, 2018Updated 8 years ago
- Collection of algorithms in Computational Geometry.☆18Oct 13, 2017Updated 9 years ago