☆30Jul 29, 2026Updated 3 months ago
Alternatives and similar repositories for Riptides
Users that are interested in Riptides are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Dec 8, 2025Updated 11 months ago
- A cyclic peptide-protein complex dataset derived from AFDB.☆71Oct 29, 2026Updated last week
- Automated workflow for building Amber-ready peptide systems with noncanonical amino acids, covalent modifications, and cyclic linkages by…☆11Jun 9, 2026Updated 5 months ago
- De novo Design of Macrocyclic Molecular Glues☆33Oct 14, 2026Updated 3 weeks ago
- Open source code for PepBFN.☆15Mar 4, 2026Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆28Updated this week
- CREMP: Conformer-Rotamer Ensembles of Macrocyclic Peptides for Machine Learning☆33Aug 13, 2024Updated 2 years ago
- Introduction to cyclic peptide simulations and our group's protocols.☆18Sep 21, 2023Updated 3 years ago
- ☆90Updated this week
- Accelerating Open-Source Binding Affinity Predictions☆204Aug 22, 2026Updated 2 months ago
- ExplainBind: Explainable Physicochemical Determinants of Protein–Ligand Binding via Non-Covalent Interactions☆14Mar 6, 2026Updated 8 months ago
- An introduction to small molecule drug design with practicals☆15Sep 10, 2026Updated 2 months ago
- A unified framework for making structural biology tools interoperable.☆166Oct 28, 2026Updated 2 weeks ago
- This repository enables inference and sampling for Dyno Psi-1, a de novo miniprotein binder design model.☆25Aug 25, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Genie 3 is a fast, all-atom SE(3)-equivariant diffusion model for protein design. It achieves state-of-the-art performance on uncondition…☆141Oct 12, 2026Updated 3 weeks ago
- ☆11Sep 30, 2026Updated last month
- Processed benchmark data and reproducible analyses for the OpenBind enteroviral 2A protease dataset☆62Aug 29, 2026Updated 2 months ago
- ☆13Mar 9, 2026Updated 8 months ago
- Official implementation of CP-Composer. It is the released code of 《Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints》…☆34Updated this week
- Benchmarking Cofolding Methods for Molecular Glue Ternary Structure Prediction☆17Oct 29, 2025Updated last year
- A fine-tuned version of ProteinMPNN for generating stable cyclic peptide sequences☆54Jun 30, 2026Updated 4 months ago
- Official implementation for our paper: Repurposing AlphaFold3-like Protein Folding Models for Antibody Sequence and Structure Co-design☆48Jan 8, 2026Updated 10 months ago
- Amber MD agent tooling and MCP servers☆19Jun 16, 2026Updated 4 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A Unified 3D Generative Model for Synthesizable Structure-Based Drug Design.☆99Oct 10, 2026Updated last month
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆144Jan 28, 2026Updated 9 months ago
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆72Mar 23, 2026Updated 7 months ago
- A generation framework for target-specific peptide sequence☆13Mar 31, 2026Updated 7 months ago
- An Open-source Drug Discovery Engine☆527Oct 8, 2026Updated last month
- ☆12Jan 28, 2024Updated 2 years ago
- CryoACE☆13Jul 22, 2026Updated 3 months ago
- Claude AI plugin for PyMOL to control PyMOL with plain English☆17May 21, 2026Updated 5 months ago
- ☆32May 14, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆68Sep 18, 2026Updated last month
- Fork of DiffDock designed for fine tuning.☆13Oct 26, 2025Updated last year
- IPSAE2: calculates ipSAE scores for protein/protein, protein/ligand, protein/nucleic-acid complexes, etc.☆37Nov 4, 2026Updated last week
- ☆61Nov 29, 2025Updated 11 months ago
- ☆33May 25, 2026Updated 5 months ago
- Official repository of "ODesign: A World Model for Biomolecular Interaction Design"☆353Jul 1, 2026Updated 4 months ago
- Software for automated molecular dynamics simulation☆30Mar 5, 2026Updated 8 months ago
Are these results useful?