LARS-research / EmerGNNLinks
Emerging Drug Interaction Prediction Enabled by Flow-based Graph Neural Network with Biomedical Network. Nature Computational Science. 2023.
☆30Updated 2 years ago
Alternatives and similar repositories for EmerGNN
Users that are interested in EmerGNN are comparing it to the libraries listed below
Sorting:
- Multi-view Graph Contrastive Representation Learning for Drug-drug Interaction Prediction☆44Updated 3 years ago
- Source code for TKDE'22 "KG-MTL: Knowledge Graph Enhanced Multi-Task Learning for Molecular Interaction"☆28Updated 3 years ago
- Accurate and Interpretable Drug-drug Interaction Prediction Enabled by Knowledge Subgraph Learning. Nature Communications (Medicine).☆20Updated last year
- Code and Data for the paper: Molecular Contrastive Learning with Chemical Element Knowledge Graph [AAAI 2022]☆90Updated last year
- A collection of resources related with Knowledge-augmented Graph Machine Learning for Drug Discovery.☆21Updated last year
- Source Code for IJCAI'20 "KGNN: Knowledge Graph Neural Network for Drug-Drug Interaction Prediction"☆90Updated 4 years ago
- ☆17Updated 3 years ago
- related to graph and deep Learning for drug-drug interactions prediction.☆29Updated 2 years ago
- Drug repositioning with adaptive graph convolutional networks☆16Updated last year
- The official implementation of our paper "MoleRec: Combinatorial Drug Recommendation with Substructure-Aware Molecular Representation Lea…☆65Updated 2 years ago
- ☆25Updated 3 years ago
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆30Updated 3 years ago
- ICLR'24 | BioBridge: Bridging Biomedical Foundation Models via Knowledge Graphs☆76Updated last year
- Implementation for the paper MoCL: Contrastive Learning on Molecular Graph with multi-level Domain Knowledge☆41Updated 2 years ago
- ☆34Updated 4 years ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆87Updated last year
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆83Updated 3 years ago
- Drug-Target Interaction Prediction with GraphAttention networks☆20Updated 5 years ago
- ☆58Updated 4 years ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Updated 3 months ago
- Research repo for AI aided drug discovery, de novo drug development and related topics☆37Updated 3 years ago
- Code implementation for paper "Can Large Language Models Empower Molecular Property Prediction?"☆39Updated 2 years ago
- Code and data for the Nature Machine Intelligence paper "Knowledge graph-enhanced molecular contrastive learning with functional prompt".☆130Updated last year
- "MUFFIN: Multi-Scale Feature Fusion for Drug–Drug Interaction Prediction".☆13Updated 3 years ago
- [IJCAI 2023] Graph Propagation Transformer for Graph Representation Learning☆50Updated 2 years ago
- Implementation of Self-supervised Graph-level Representation Learning with Local and Global Structure (ICML 2021).☆80Updated 4 years ago
- ☆78Updated last year
- Code and Data for the paper: Graph Sampling-based Meta-Learning for Molecular Property Prediction [IJCAI2023]☆18Updated 2 years ago
- ☆28Updated last year
- Implementation of Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature☆40Updated 4 years ago