HullLab / AutoMorph
Automated Morphometrics: image segmentation, 2D and 3D shape extraction, classification, and analysis
☆26Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for AutoMorph
- Geomorph is a software package for performing all stages of geometric morphometric shape analysis of landmark points and curves in 2-and-…☆76Updated this week
- An R package for quantifying color pattern variation☆31Updated 4 months ago
- R package for cladistic disparity☆13Updated 2 months ago
- LeafMachine2 is a modular suite of computer vision and machine learning algorithms that enables efficient identification, location, and m…☆26Updated last month
- ☆14Updated 5 years ago
- The Taxonomic Name Resolution Service is a free utility for correcting and standardizing plant names.☆30Updated 2 years ago
- GNverifier verifies scientific names against more than 100 biodiversity databases☆20Updated this week
- collBook: Refine biological field observations☆12Updated last year
- TaxoNERD : recognizing taxonomic entities using deep models☆39Updated 4 months ago
- R package for the collection of shape data using a stereo camera setup☆17Updated 2 years ago
- GNfinder finds scientific names in UTF8 texts, PDF files, MS Word/Excel documents, URLs etc.☆44Updated 4 months ago
- taxonomic classes for Python☆10Updated 3 years ago
- An ontology for describing the phenology of individual plants and populations of plants, and for integrating plant phenological data acro…☆16Updated 4 months ago
- Course repository for Methods in Biodiversity Analysis☆21Updated last year
- signatselect: Identifying signatures of selection☆11Updated 4 years ago
- This is a short response to the 2018 RFI on NIH Strategic Plan for Data Science☆16Updated 6 years ago
- Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…☆24Updated 3 years ago
- R Package - 3D Reconstruction of Archaeological Excavations☆12Updated 4 years ago
- SpadeR provides simple R functions to compute various biodiversity indices and related (dis)similarity measures based on individual-based…☆27Updated 6 years ago
- Markov random fields with covariates☆23Updated 7 months ago
- Mathematical Morphology in Any Number of Dimensions☆37Updated 7 months ago
- Standardize taxonomy across different data sources☆20Updated 2 years ago
- PyRate is a program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework.☆77Updated this week
- Machine-learning-based morphometrics☆31Updated 4 years ago
- Plos in Computational Biology paper related with github for researchers, code, source and document☆58Updated 8 years ago
- ☆37Updated this week
- The Leipzig Catalogue of Vascular Plants☆17Updated 2 years ago
- Computes affinity between two entities based on their co-occurrence☆26Updated last year
- R package to perform sensitivity analysis for comparative methods☆12Updated 4 years ago
- Stray has been renamed fido, development continues at jsilve24/fido☆23Updated 2 years ago