CLEF-TAR / tar
Technologically Assisted Reviews in Empirical Medicine
☆23Updated last year
Related projects ⓘ
Alternatives and complementary repositories for tar
- ☆90Updated 5 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆44Updated 4 years ago
- Python wraper for MetaMap☆170Updated 4 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated last year
- PubMed PICO Element Detection Dataset☆55Updated 6 years ago
- Resourses of pre-trained word representations on clinical texts.☆12Updated 5 years ago
- ☆70Updated 11 months ago
- Code for AttentionMeSH☆17Updated 6 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆61Updated 3 years ago
- ☆12Updated 6 years ago
- PubMed 200k RCT dataset: a large dataset for sequential sentence classification.☆192Updated last year
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆312Updated 3 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆157Updated 3 years ago
- Conversion from brat-flavored standoff to CoNLL format☆50Updated 3 years ago
- Converts Brat formatted annotations to CoNLL format for Named entity recognition☆20Updated last year
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆37Updated 8 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆161Updated last year
- A system for normalizing disorder mentions in biomedical data.☆19Updated 9 years ago
- ☆144Updated 11 months ago
- ☆21Updated 2 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 4 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆37Updated 6 years ago
- Natural language structuring library☆19Updated 5 months ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 5 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆27Updated 3 years ago
- Weakly supervised medical named entity classification☆70Updated last year
- NCBI disease corpus - related resources☆26Updated 7 years ago
- Dataset accompanying the SPECTER model☆127Updated last year
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆174Updated 2 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆174Updated last year