AnnekeMeyer / zone-segmentation
Segmentation of prostatic zones (peripheral zone, central gland, AFS and distal prostatic urethra )
☆19Updated 4 years ago
Alternatives and similar repositories for zone-segmentation:
Users that are interested in zone-segmentation are comparing it to the libraries listed below
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆82Updated 2 years ago
- This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…☆51Updated 2 years ago
- ☆66Updated 11 months ago
- Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder str…☆40Updated 3 years ago
- sourcecode of multi-planar prostate segmentation (ISBI publication in 2018)☆17Updated 5 years ago
- 3D Slicer extension for streamlined annotation of images☆11Updated 11 months ago
- DICOM RT-Struct to mask☆101Updated last year
- A grid sampler for larger-than-memory N-dimensional images☆23Updated 9 months ago
- Source code of the paper "Anisotropic 3D Multi-Stream CNN for Accurate Prostate Segmentation from Multi-Planar MRI".☆16Updated 4 years ago
- Robust Brain Extraction Tool for CT Head Images☆46Updated 4 years ago
- Official PyTorch implementation of InExtremIS☆22Updated 3 years ago
- Deep Attentive Features for Prostate Segmentation in 3D Transrectal Ultrasound☆74Updated 4 years ago
- Learning Deformable Registration of Medical Images with Anatomical Constraints☆23Updated last year
- ☆76Updated last year
- Code for MRI Prostate Segmentation and Contouring☆14Updated 4 years ago
- Computes vesselness scores for 3-dimensional images.☆70Updated 8 years ago
- The project covers various deep learning models to automate the segmentation of knee cartilages using the diffusion weighted MRI☆23Updated 6 years ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆104Updated last year
- A segmentation network for intracranial aneurysm on CTA images using pytorch☆41Updated 2 years ago
- VNet for 3d volume segmentation☆44Updated 4 years ago
- Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)☆48Updated last year
- Morphological organ segmentation for CT scans☆20Updated 4 years ago
- ICH Segmentation of CT scans☆26Updated 2 months ago
- Model for the detection, segmentation, and classification of prostate lesions from mpMRI, using ProstateX data and Retina U-Net☆66Updated 3 years ago
- COVID-19 Pneumonia Lesion segmentation network☆88Updated 3 years ago
- Segmentation of prostate from MRI scans☆45Updated 3 years ago
- Deep Learning Registration of the Prostate☆54Updated last year
- Read and process medical data with PyTorch☆18Updated 5 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis☆61Updated 4 months ago