AammarTufail / biol217_2025Links
☆15Updated 7 months ago
Alternatives and similar repositories for biol217_2025
Users that are interested in biol217_2025 are comparing it to the libraries listed below
Sorting:
- The NFDI4Microbiota Knowledge Base, for visualizing dev branch: https://kb-dev.nfdi4microbiota.de☆30Updated 2 weeks ago
- A scalable high-throughput metabolic and biogeochemical functional trait profiler☆204Updated 8 months ago
- ☆10Updated 6 months ago
- ☆17Updated 3 months ago
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆442Updated 2 years ago
- GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.☆543Updated 2 weeks ago
- ☆146Updated last year
- geNomad: Identification of mobile genetic elements☆258Updated 2 weeks ago
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆386Updated 3 months ago
- customizable pipeline to identify viral sequences from (meta)genomic data☆267Updated 10 months ago
- This repo is designed as a step-by-step tutorial to teach RNA-seq analysis☆15Updated 3 months ago
- Rapid large-scale prokaryote pan genome analysis☆354Updated 3 years ago
- Mass screening of contigs for antimicrobial and virulence genes☆436Updated last year
- Assessing the quality of metagenome-derived genome bins using machine learning☆227Updated 6 months ago
- NCBI Prokaryotic Genome Annotation Pipeline☆354Updated 3 weeks ago
- Fast Whole-Genome Similarity (ANI) Estimation☆430Updated 2 months ago
- IQ-TREE software version 2: phylogenetics by maximum likelihood☆304Updated 4 months ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆552Updated 3 weeks ago
- This repo collects the list of learning online resources related to microbiome computational science and tools.☆99Updated 10 months ago
- Scan contig files against PubMLST typing schemes☆244Updated 2 years ago
- Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes☆295Updated last week
- Build a partitioned pangenome graph from microbial genomes☆280Updated last week
- antiSMASH☆223Updated 3 weeks ago
- ☆115Updated last year
- fast phage annotation program☆178Updated last week
- Toolbox for comparative genomics of MAGs☆85Updated last week
- 🍄 Qiime2 ITS classifiers for the UNITE database☆45Updated last month
- CarveMe: genome-scale metabolic model reconstruction☆184Updated 2 weeks ago
- ☆15Updated 3 years ago
- Rapid comparison and dereplication of genomes☆310Updated 3 months ago