Alternatives and similar repositories for TocoDecoy

Users that are interested in TocoDecoy are comparing it to the libraries listed below

• iipharma / transpharmer-repo
  ☆40Updated 6 months ago
• NilsDunlop / PROTACFold
  A toolkit developed to predict and analyze PROTAC-mediated ternary complexes using AlphaFold3 and Boltz-1.
  ☆34Updated 2 months ago
• gaoqiweng / PROTAC-Model
  Integrative modeling of PROTAC-mediated ternary complex
  ☆28Updated 3 years ago
• Brian-hongyan / DeepCoSI
  DeepCoSI: a Structure-based Deep Graph Learning Network Method for Covalent Binding Site Identification.
  ☆14Updated last year
• MolecularAI / DockStreamCommunity
  ☆26Updated 2 years ago
• hnlab / BindingNet
  ☆25Updated last year
• MolecularAI / Lib-INVENT-dataset
  ☆21Updated 2 years ago
• oxpig / MolSnapper
  ☆51Updated 5 months ago
• jacquesboitreaud / OptiMol
  Optimization of binding affinities in chemical space for drug discovery
  ☆35Updated 2 years ago
• molML / traversing_chem_space
  ☆27Updated last year
• ashipiling / GPT_3DSMILES
  ☆30Updated last month
• NiBoyang / AutoDock-SS
  Use AutoDock for Ligand-based Virtual Screening
  ☆23Updated last year
• tiantz17 / CARA
  Benchmarking compound activity prediction for real-world drug discovery applications
  ☆14Updated last year
• pfizer-opensource / transform-molecules
  ☆17Updated 2 years ago
• AspirinCode / GENiPPI
  Interface-aware molecular generative framework for protein-protein interaction modulators
  ☆16Updated 9 months ago
• oxpig / Fragmenstein
  Merging, linking and placing compounds by stitching bound compounds together like a reanimated corpse
  ☆13Updated last year
• Vfold-RNA / RLDOCK
  ☆33Updated last year
• VicFisher / DiffPhore
  Knowledge-Guided Diffusion Model for 3D Ligand-Pharmacophore Mapping
  ☆41Updated 3 months ago
• ohuelab / QEPPI
  Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions
  ☆18Updated last year
• zhenglz / OnionNet-SFCT
  Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term
  ☆29Updated 10 months ago
• keiserlab / autofragdiff
  Autoregressive fragment-based diffusion for target-aware ligand design
  ☆30Updated last year
• egg5154 / MolSculptor
  ☆21Updated this week
• kimeguida / ProCare
  ProCare: A Point Cloud Registration Approach to Align Protein Cavities
  ☆30Updated 2 years ago
• micahwang / RELATION
  ☆17Updated 2 years ago
• oxpig / DEVELOP
  ☆55Updated last year
• biomed-AI / DRlinker
  ☆25Updated 2 years ago
• plainerman / DiffDock-Pocket
  Implementation of DiffDock-Pocket: Diffusion for Pocket-Level Docking with Side Chain Flexibility
  ☆32Updated last year
• jkwang93 / ChemistGA
  ☆23Updated 3 years ago
• rareylab / InteractionDrawer
  InteractionDrawer is a JavaScript library for the drawing of highly interactive 2D ligand interaction diagrams.
  ☆22Updated last year
• FatimaNoor74 / VirtuDockDL
  ☆20Updated last year