Alternatives and similar repositories for DeepGraph:

Users that are interested in DeepGraph are comparing it to the libraries listed below

• LUOyk1999 / HDSE
  [NeurIPS 2024] Implementation of "Enhancing Graph Transformers with Hierarchical Distance Structural Encoding"
  ☆14Updated 4 months ago
• kimsu55 / ToxExpert
  ☆13Updated 2 years ago
• lvkd84 / GraphFP
  Implementation of Fragment-based Pretraining and Finetuning on Molecular Graphs (NeurIPS 2023)
  ☆19Updated 9 months ago
• yangnianzu0515 / MoleOOD
  Official implementation for the paper "Learning Substructure Invariance for Out-of-Distribution Molecular Representations" (NeurIPS 2022)…
  ☆61Updated 2 years ago
• syr-cn / SimSGT
  [NeurIPS 2023] "Rethinking Tokenizer and Decoder in Masked Graph Modeling for Molecules"
  ☆34Updated last year
• Graph-and-Geometric-Learning / MolGroup
  Learning to Group Auxiliary Datasets for Molecule, NeurIPS2023
  ☆19Updated last year
• shamim-hussain / egt_pytorch
  Edge-Augmented Graph Transformer
  ☆76Updated last year
• liugangcode / Graph-DiT
  The code for "Graph Diffusion Transformer for Multi-Conditional Molecular Generation"
  ☆56Updated 2 months ago
• GRAPH-0 / CDGS
  Conditional Diffusion Based on Discrete Graph Structures for Molecular Graph Generation
  ☆33Updated last year
• AlgoMole / MolFM
  Implementation for NeurIPS 2023 paper "Equivariant Flow Matching with Hybrid Probability Transport for 3D Molecule Generation"
  ☆33Updated 10 months ago
• RomanBresson / KAGNN
  This is the official repository for our paper KAGNNs: Kolmogorov-Arnold Networks meet Graph Learning.
  ☆40Updated 3 weeks ago
• shamim-hussain / tgt
  Triplet Graph Transformer
  ☆41Updated 9 months ago
• HICAI-ZJU / iMoLD
  Official implementation for Learning Invariant Molecular Representation in Latent Discrete Space (NeurIPS 2023)
  ☆21Updated last year
• LiuChuang0059 / Gradformer
  Code for IJCAI'24 paper: Gradformer: Graph Transformer with Exponential Decay
  ☆43Updated 3 months ago
• zhao-ht / GIMLET
  The code for GIMLET: A Unified Graph-Text Model for Instruction-Based Molecule Zero-Shot Learning
  ☆61Updated last year
• LiamMa / GRIT
  This is an official implementation for "GRIT: Graph Inductive Biases in Transformers without Message Passing".
  ☆118Updated 3 months ago
• Rich-XGK / GTMGC
  Implementation of GTMGC: Using Graph Transformer to Predict Molecule’s Ground-State Conformation (ICLR2024 Spotlight).
  ☆16Updated last year
• junxia97 / Mole-BERT
  [ICLR 2023] "Mole-BERT: Rethinking Pre-training Graph Neural Networks for Molecules"
  ☆114Updated last year
• GLAD-RUC / GGNN4Science
  ☆115Updated 3 weeks ago
• lsj2408 / Graphormer-GD
  [ICLR 2023 notable top-5%] Rethinking the Expressive Power of GNNs via Graph Biconnectivity (official implementation)
  ☆104Updated last year
• Lucius-lsr / AdapterGNN
  ☆29Updated last year
• tufts-ml / graph-generation-EDGE
  EDGE: Efficient and Degree-Guided Graph Generation via Discrete Diffusion Modeling
  ☆55Updated last year
• LUMIA-Group / Cluster-wise-Graph-Transformer
  Official implementation for "Cluster-wise Graph Transformer with Dual-granularity Kernelized Attention" (NeurIPS2024 Spotlight)
  ☆10Updated 5 months ago
• FanmengWang / MMPolymer
  [CIKM2024] The official implementation of "MMPolymer: A Multimodal Multitask Pretraining Framework for Polymer Property Prediction"
  ☆19Updated 4 months ago
• Graph-and-Geometric-Learning / HyBRiD
  Official implementation of paper "Learning High-Order Relationships of Brain Regions" [ICML 2024]
  ☆17Updated 3 weeks ago
• Graph-COM / LRI
  [ICLR 2023] Learnable Randomness Injection (LRI) for interpretable Geometric Deep Learning.
  ☆23Updated last year
• lsh0520 / RGCL
  Ratioanle-aware Graph Contrastive Learning codebase
  ☆40Updated last year
• Samyu0304 / graph-information-bottleneck-for-Subgraph-Recognition
  ☆52Updated 2 years ago
• lenscloth / GRPE
  Official Implementation of "GRPE: Relative Positional Encoding for Graph Transformer"
  ☆55Updated 2 years ago
• null-xyj / CoBFormer
  Implementation of ICML'24 Paper "Less is More: on the Over-Globalizing Problem in Graph Transformers"
  ☆42Updated 10 months ago