tylerjereddy / diffusion_analysis_MD_simulationsLinks
Python utility functions for the analysis of diffusion in molecular dynamics simulation trajectories.
☆16Updated 3 years ago
Alternatives and similar repositories for diffusion_analysis_MD_simulations
Users that are interested in diffusion_analysis_MD_simulations are comparing it to the libraries listed below
Sorting:
- Analysis of Molecular Dynamics output in the IPython Notebook☆10Updated 8 years ago
- Multipurpose ab initio MD program.☆9Updated 2 months ago
- A python script to plot an energy level diagram from an input file.☆29Updated 4 years ago
- Parallel Lammps Python interface - control a mpi4py parallel LAMMPS instance from a serial python process or a Jupyter notebook☆33Updated this week
- A set of tutorials to introduce new users to mBuild☆11Updated 4 years ago
- Playmol is a(nother) software for building molecular models☆19Updated 2 years ago
- Onsager coefficients for interstitial and vacancy-mediated diffusion☆13Updated 5 months ago
- Python Multiscale Thermochemistry Toolbox (pMuTT)☆47Updated last week
- An Avogadro plugin with a gui to create packmol input files and run packmol from within Avogadro.☆11Updated 15 years ago
- Atomistic Manipulation Toolkit☆36Updated 2 weeks ago
- Resources for teaching quantum chemistry courses in Bonn☆41Updated last month
- Python wrapper for packmol molecule packing program☆12Updated 9 years ago
- Course repository for 06-623☆13Updated 5 years ago
- Molecular dynamics and Monte Carlo simulation package for polymeric and molecular liquids☆34Updated 3 years ago
- Python program for aggregation and reaction☆21Updated 9 months ago
- A simple Lennard-Jones molecular dynamics software☆26Updated last year
- Data files which may be used to test examples accompanying the book "Computer Simulation of Liquids" by Michael P. Allen and Dominic J. T…☆15Updated 7 years ago
- A framework for conducting polymer reference interaction site model (PRISM) calculations☆42Updated 4 years ago
- Molecular Simulation with Machine Learning - On-line workshop, July 13-14, 2020☆22Updated 5 years ago
- ase interface for Quantum Espresso☆22Updated 4 years ago
- Python tool to manipulate Gaussian cube files☆44Updated 2 years ago
- This library tackles the construction and efficient execution of computational chemistry workflows☆49Updated last year
- Course materials for NANO 106 - Crystallography of Materials☆35Updated 3 years ago
- Provides some useful information and the LAMMPS input files to model a polymer-metal interface.☆38Updated 3 years ago
- An interactive structure viewer alongside its simulated diffraction pattern☆18Updated 4 months ago
- A set of tutorials to introduce new users to the MoSDeF (Molecular Simulation Design Framework) toolkit☆26Updated last year
- The TurboGAP code☆18Updated last month
- Software Suite for Advanced General Ensemble Simulations☆88Updated 2 years ago
- Python code for learning Molecular Dynamics simulations☆53Updated 4 years ago
- ☆43Updated 2 months ago