mosdef-hub / mosdef_tutorialsLinks
A set of tutorials to introduce new users to the MoSDeF (Molecular Simulation Design Framework) toolkit
☆27Updated last year
Alternatives and similar repositories for mosdef_tutorials
Users that are interested in mosdef_tutorials are comparing it to the libraries listed below
Sorting:
- ☆61Updated 3 months ago
- ☆21Updated 2 weeks ago
- Machine learning exercises for the MolSim course (http://www.acmm.nl/molsim/molsim2023/index.html)☆28Updated last year
- AutoTST: A framework to perform automated transition state theory calculations☆44Updated last year
- A wrapper to run xtb inside Gaussian.☆23Updated 5 years ago
- Flexible storage of chemical topology for molecular simulation☆64Updated this week
- Database of hand-built OPLS-AA parameters and topologies for 464 molecules. Zip files contains parameter and topologies for OpenMM, Groma…☆35Updated 7 years ago
- Automated workflow for generating quantum chemistry calculation of explicitly solvated molecules☆54Updated last month
- Suite of programs to perform non-linear dimensionality reduction -- sketch-map in particular☆46Updated last year
- A set of tutorials to introduce new users to mBuild☆11Updated 4 years ago
- Stand-alone thermochemistry in python for ORCA and Gaussian.☆32Updated last year
- Python interface for Enhanced Monte Carlo (EMC)☆21Updated last week
- An interactive structure viewer alongside its simulated diffraction pattern☆19Updated last week
- MLP training for molecular systems☆54Updated last month
- A comprehensive tool for analyzing liquid solvation structure.☆54Updated 3 months ago
- Python wrapper for packmol molecule packing program☆12Updated 9 years ago
- This small repository provides functionality for calculating the charge transfer integrals between two molecules.☆32Updated 2 years ago
- Development of High-Throughput Polymer Network Atomistic Simulation☆25Updated 11 months ago
- A collection of tools designed for the automatic construction, and subsequent analysis, of chemical compounds.☆20Updated 4 months ago
- This python code creates hybrid MD/MC (NAMD/GOMC) simulations for the NVT, NPT, GCMC, and GEMC-NVT ensembles☆43Updated last week
- A codebase for classical molecular dynamics (MD) simulation setup and results analysis.☆26Updated last year
- ☆26Updated this week
- This library tackles the construction and efficient execution of computational chemistry workflows☆50Updated last year
- Quick Reaction Coordinate using Python☆39Updated last year
- ☆24Updated 2 years ago
- Analyse Rotational Diffusion Tensor from MD Simulations☆21Updated 11 months ago
- a unified interface for molecular harmonic vibrational frequency calculations☆31Updated 2 months ago
- Deep Modeling for Molecular Simulation, two-day virtual workshop, July 7-8, 2022☆53Updated 3 years ago
- A collection of interpretive chemical tools for analyzing outputs of the quantum chemistry calculations.☆52Updated last year
- Code to compute Onsager transport coefficients from molecular dynamics simulations using mean-square displacements.☆29Updated 4 years ago