Software Carpentry Version 4 lessons.
☆33May 31, 2023Updated 2 years ago
Alternatives and similar repositories for v4
Users that are interested in v4 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A cross-package Bioconductor workflow for analysing methylation array data☆11Mar 31, 2017Updated 9 years ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- R package for analysis of single-cell data using graphs☆11Jun 8, 2023Updated 2 years ago
- A repository for hosting Nextflow DSL2 module files containing tool-specific process definitions and their associated documentation for M…☆11May 14, 2026Updated 2 weeks ago
- My notes/usage examples for various Bioconductor packages☆15Jan 9, 2017Updated 9 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Datasette plugin providing a UI for executing SQL writes against the database☆12Nov 11, 2025Updated 6 months ago
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Jun 7, 2018Updated 7 years ago
- Bioinformatics / Explore oligonucleotide composition similarity between assembly contigs or scaffolds to detect contaminant DNA.☆12Feb 27, 2019Updated 7 years ago
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆10May 29, 2017Updated 9 years ago
- Manage the visualization of large amounts of other people's [often messy] genomics data☆18Apr 10, 2016Updated 10 years ago
- ☆10Jul 22, 2020Updated 5 years ago
- ☆16Apr 11, 2025Updated last year
- Mapping NCBI Genbank accession to GTDB accession☆14Feb 13, 2021Updated 5 years ago
- python stuff I use☆20Feb 16, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tools for analyzing and comparing SARS-CoV-2 phylogenies☆10Nov 21, 2020Updated 5 years ago
- RNA velocity validation☆22Mar 16, 2022Updated 4 years ago
- ☆11Sep 28, 2017Updated 8 years ago
- Makes distinct TSS of each gene from a Gencode annotation☆10Oct 19, 2016Updated 9 years ago
- A python library for advanced lattice light-sheet image analysis☆21Sep 9, 2020Updated 5 years ago
- An Obsidian plugin to create meeting notes from Microsoft Outlook .msg files☆15Apr 2, 2025Updated last year
- TFFM framework☆13Sep 22, 2025Updated 8 months ago
- Materials for Mike's PyCon Canada 2016 PySpark Tutorial☆12Nov 13, 2016Updated 9 years ago
- TCGA data acquisition and processing for Project Cognoma☆23Apr 19, 2018Updated 8 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Notes on Advanced Placement Physics C: Electricity and Magnetism☆13May 13, 2019Updated 7 years ago
- A python module for the clustergrammer matrix visualization project that creates the JSON object for the front-end JavaScript portion of …☆12May 5, 2021Updated 5 years ago
- A python script used to annotate genomic intervals.☆18May 29, 2020Updated 6 years ago
- CLI for archiving pages and its all links to Wayback Machine☆14Mar 10, 2022Updated 4 years ago
- Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files☆10Dec 26, 2022Updated 3 years ago
- A tutorial for the analysis of high-dimensional flow cytometry data☆27Aug 28, 2019Updated 6 years ago
- An IPython Notebook reader for Pelican☆10May 13, 2015Updated 11 years ago
- A simple audio spectrum visualizer☆13Apr 15, 2022Updated 4 years ago
- Subsampling of high-throughput sequencing count data☆20May 10, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- LEArning Spatiotemporal Patterns in Python☆25Apr 28, 2026Updated last month
- Data files and scripts for the ASU PHY494 class. Will be updated as we go along.☆10Jan 6, 2022Updated 4 years ago
- Mona robot's basic functions and test code in Arduino☆11Jan 3, 2019Updated 7 years ago
- Statistical and Thermal Physics☆13Feb 1, 2021Updated 5 years ago
- DEPRECATED: please see individual lesson repositories for current material.☆96Aug 1, 2016Updated 9 years ago
- Essay on Hamiltonian Monte Carlo in PyMC3☆15Apr 6, 2023Updated 3 years ago
- Python command line tools as productivity supplements for Posix systems☆17Apr 4, 2024Updated 2 years ago