Alternatives and similar repositories for skeletonization

Users that are interested in skeletonization are comparing it to the libraries listed below

• simeks / deform
  Efficient dense deformable image registration
  ☆27Updated 2 years ago
• aAbdz / CylShapeDecomposition
  Cylindrical Shape Decomposition
  ☆16Updated 2 years ago
• amy-tabb / CurveSkel-Tabb-Medeiros-2018
  A curve skeletonization method for elongated objects that may be noisy, IEEE WACV paper, Aug. 2018 update.
  ☆11Updated last year
• bbrister / cudaImageWarp
  Quickly warp 3D images on the GPU using CUDA. Works with C and Python.
  ☆24Updated 4 years ago
• yihao6 / vfa
  ☆13Updated 2 months ago
• wangdingkang / DiscreteMorse
  Discrete Morse-based pipeline for neuron tracing on tracer injection and single-neuron data sets.
  ☆12Updated 4 years ago
• cbm755 / fast_marching_kroon
  patches for Dirk-Jan Kroon's Fast Marching Matlab Toolbox
  ☆12Updated 10 years ago
• aehrc / Mirorr
  Mirorr: Multimodal Image Registration using blOck-matching and Robust Regression
  ☆29Updated 4 years ago
• thomgrand / fim-python
  This repository implements the Fast Iterative Method (FIM) for use in python
  ☆10Updated last year
• amy-tabb / tabb-level-set-segmentation
  A 3D level set method, based on a paper for X-Ray CT segmentation of root systems in WACV 2018.
  ☆25Updated 5 years ago
• biomedia-mira / drop2
  drop2 - intensity-based image registration
  ☆37Updated 4 years ago
• shirgur / UMIS
  Official PyTorch implementation of "Unsupervised Microvascular Image Segmentation Using an Active Contours Mimicking Neural Network"
  ☆73Updated 4 years ago
• kevin-keraudren / chanvese
  Chan-Vese level-sets in Python
  ☆94Updated 4 years ago
• yzhong52 / ThinVesselSegmentation
  C++ implementation of vesselness measure (or vesselness filter). Both CPU and GPU version are available.
  ☆43Updated 7 years ago
• amy-tabb / CurveSkel-Tabb-Medeiros
  A curve skeletonization method for elongated objects that may be noisy.
  ☆14Updated last year
• KitwareMedical / tensorboard-plugin-3d
  ☆36Updated 3 years ago
• fgrelard / OrthogonalPlaneBasedTools
  ☆13Updated 5 years ago
• dchansen / gt-tomography
  ☆13Updated 5 years ago
• mmkamani7 / Skeletonization
  In this repository you can see the code for skeletonization of binary images using our novel fuzzy inference system.
  ☆32Updated 4 years ago
• valette / FROG
  Fast Registration Of image Groups
  ☆12Updated last month
• andreasmang / claire
  Constrained Large Deformation Diffeomorphic Image Registration (CLAIRE)
  ☆50Updated 4 months ago
• berendkleinhaneveld / Registrationshop
  Interactive registration tool for 3D medical datasets
  ☆33Updated last year
• mwagner9 / BEGPUThinning
  ☆31Updated 4 years ago
• oesteban / RegSeg
  RegSeg is a simultaneous segmentation and registration method that uses active contours without edges (ACWE) extracted from structural im…
  ☆14Updated 7 years ago
• AymericFerreira / spineReconstruction
  Simple scripts to reconstruct 3D objects from images based on Chan-Vese Segmentation and Marching Cube algorithm.
  ☆11Updated last year
• InsightSoftwareConsortium / ITKThickness3D
  An ITK module to compute 3D thickness
  ☆42Updated 2 months ago
• VirtualPlants / timagetk
  3D and 2D Image processing algorithms in Python for tissues
  ☆13Updated 10 months ago
• SuperElastix / SuperElastix
  Official SuperElastix repository
  ☆87Updated 6 years ago
• TomographicImaging / CCPi-Regularisation-Toolkit
  The set of CPU/GPU optimised regularisation modules for iterative image reconstruction and other image processing tasks
  ☆57Updated 7 months ago
• luisibanez / ContourToSurfaceRegistration
  Registration between 2D contour and a 3D image based on ITK
  ☆21Updated 14 years ago