robomorelli / cell_counting_yellowLinks
Starting point for cell_counting_yellow
☆30Updated 3 years ago
Alternatives and similar repositories for cell_counting_yellow
Users that are interested in cell_counting_yellow are comparing it to the libraries listed below
Sorting:
- Scalable Instance Segmentation using PyTorch & PyTorch Lightning.☆147Updated 9 months ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆175Updated 3 years ago
- Segment anything with our Napari integration of Meta AI's Segment Anything Model (SAM)!☆243Updated last year
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆117Updated this week
- Deep Learning Framework for Image Classification & Regression in Pytorch for Fast Experiments☆58Updated 11 months ago
- [WACV 2023] Official implementation of The Fully Convolutional Transformer for Medical Image Segmentation☆142Updated 2 years ago
- StarDist PyTorch☆47Updated 3 years ago
- ☆37Updated 2 years ago
- Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis☆169Updated last year
- a metric library for Medical Image Segmentation EVALuation☆120Updated last year
- ☆43Updated 3 years ago
- OCELOT 2023: Cell Detection from Cell-Tissue Interaction☆17Updated last month
- Skeleton Recall Loss for Connectivity Conserving and Resource Efficient Segmentation of Thin Tubular Structures☆130Updated 2 months ago
- A novel segmentation model termed Swin UNEt TRansformers (Swin UNETR). Specially for the task of 3D semantic segmentation.☆91Updated 3 years ago
- [MICCAI 2024] CUTS: A Deep Learning and Topological Framework for Multigranular Unsupervised Medical Image Segmentation☆41Updated 8 months ago
- One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification☆99Updated last year
- (NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality …☆157Updated last year
- Interactive Segmentation of Nucleus☆67Updated 3 years ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆41Updated last month
- ☆95Updated 8 months ago
- The MAMA-MIA Dataset: A Multi-Center Breast Cancer DCE-MRI Public Dataset with Expert Segmentations☆92Updated 9 months ago
- Towards ubiquitous ultrasound.☆49Updated 9 months ago
- Benchmarking toolkit for patch-based histopathology image classification.☆43Updated 2 years ago
- Set of models for segmentation of 3D volumes☆137Updated last year
- A package to compute medical segmentation metrics.☆182Updated last year
- ☆84Updated 8 months ago
- Bayesian Inference of Slide-level Confidence via Uncertainty Index Thresholding☆30Updated last year
- ☆67Updated last year
- Codebase for "A Foundation Model for Cell Segmentation"☆174Updated 3 months ago
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆358Updated 6 months ago