razeineldin / DeepSeg
DeepSeg: Deep Neural Network Framework for Automatic Brain Tumor Segmentation using Magnetic Resonance FLAIR Images
☆26Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for DeepSeg
- Introduction to medical image processing with Python: CT lung and vessel segmentation without labels https://theaisummer.com/medical-imag…☆59Updated 2 years ago
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆65Updated last month
- We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D U…☆108Updated 4 years ago
- Pytorch implementaion of UNet, Deep ResUnet and ONet models for the brain tumor segmentation task☆69Updated last year
- Deep learning based skull stripping and FLAIR abnormality segmentation in brain MRI using U-Net☆128Updated 5 years ago
- [MICCAI'2020 PRIME] Uniformizing Techniques to Process CT scans with 3D CNNs for Tuberculosis Severity Estimation.☆56Updated 2 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆62Updated 3 years ago
- Lung Segmentation UNet model on 3D CT scans☆48Updated 4 years ago
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆75Updated last month
- 3D-UCaps: 3D Capsules Unet for Volumetric Image Segmentation (MICCAI 2021)☆69Updated last week
- A simple implementation of 3D-Unet on a 3D Prostate Segmentation Task☆40Updated 6 years ago
- Multimodal Brain Tumor Segmentation using BraTS 2018 Dataset.☆47Updated 3 years ago
- Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks☆185Updated last year
- A 3D U-Net Based Solution to BraTS 2019 in Keras☆49Updated 4 years ago
- Chechink the performance of different augmentation techniques on the BraTS 2020 data.☆22Updated 3 years ago
- This is a repository containing code to Paper "Optimized High Resolution 3D Dense-U-Net Network for Brain and Spine Segmentation" publish…☆213Updated 4 years ago
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆71Updated last month
- 3d unet and 3d autoencoder for automatical segmentation and feature extraction.☆31Updated 4 years ago
- Brain Segmentation on MRBrains18☆45Updated 5 years ago
- Code and models for the paper ISLES Challenge: U-shaped Convolution Neural Network with Dilated Convolution for 3D Stroke Lesion Segment…☆31Updated 5 years ago
- Use of state of the art Convolutional neural network architectures including 3D UNet, 3D VNet and 2D UNets for Brain Tumor Segmentation a…☆164Updated 4 years ago
- ☆23Updated 3 years ago
- A module for 3D image augmentations for deep learning, specifically medical images such as CT, MRI.☆26Updated 4 years ago
- MRI Brain Tumor Segmentation - BraTS Challenge 2020☆48Updated 3 years ago
- Deep learning-based segmentation and classification of lung nodules☆27Updated 3 years ago
- This is N4 bias field correction for MRI☆23Updated 6 years ago
- Hand-crafted radiomics and deep learning-based radiomcis features extraction.☆78Updated 2 years ago
- DICOM RT-Struct to mask☆93Updated 8 months ago
- This is a complete guide on how to do Pyradiomics based feature extraction and then, build a model to calculate the grade of glioma.☆25Updated 4 years ago
- Robust Brain Extraction Tool for CT Head Images☆44Updated 4 years ago