rachellea / sarle-labelerLinks
Automatic extraction of structured labels from radiology reports. From paper Draelos et al. "Machine-Learning-Based Multiple Abnormality Prediction with Large-Scale Chest Computed Tomography Volumes."
☆13Updated 3 years ago
Alternatives and similar repositories for sarle-labeler
Users that are interested in sarle-labeler are comparing it to the libraries listed below
Sorting:
- This repository provides a 3D implementation of DINOv2 for self-supervised pretraining on volumetric (3D) medical images using Lightly, M…☆43Updated last week
- Segmentation of prostate from MRI scans☆44Updated 4 years ago
- Pretrained parameters for CT deep learning models.☆13Updated 6 years ago
- Code base for BMVC paper: Variational Autoencoders for Feature Exploration and Malignancy Prediction of Lung Lesions☆11Updated 8 months ago
- Implementation code for "Lung Nodule Detection and Classification from Thorax CT-Scan Using RetinaNet with Transfer Learning" (2020)☆34Updated 6 months ago
- AeroPath: An airway segmentation benchmark dataset with challenging pathology☆45Updated 4 months ago
- ☆15Updated 6 years ago
- ☆24Updated 3 years ago
- MEDPSeg: Official implementation of Modified EfficientDet for Pulmonary Polymorphic Segmentation☆25Updated 3 months ago
- Source implementation and pointer to pre-trained models for Chexpert++, a BERT-based approximation to CheXpert for radiology report label…☆19Updated 5 years ago
- Gifsplanation - Explaining neural networks with gifs!☆27Updated last year
- ☆22Updated last month
- ☆35Updated 2 years ago
- Report Guided Annotation☆22Updated 11 months ago
- fitushar / WeaklySupervised-3D-Classification-of-Chest-CT-using-Aggregated-MultiResolution-Segmentation-FeatureThis Repo contains the updated implementation of our paper "Weakly supervised 3D classification of chest CT using aggregated multi-resolu…☆25Updated 5 years ago
- Image analysis approaches to analyze the OAI magnetic resonance images☆27Updated last year
- Segmentation of lungs in 3D Computed Tomography (CT) scans via non-rigid image registration☆23Updated 5 years ago
- ☆10Updated 4 years ago
- ☆24Updated 2 years ago
- Clinically-Interpretable Radiomics [MICCAI'22, CMPB'21]☆40Updated 2 years ago
- This is the code for the MICCAI 2021 paper Self-Supervised Vessel Enhancement Using Flow-Based Consistencies.☆29Updated 4 years ago
- Repository for Vesselness algorithms☆49Updated last month
- Medical Image Analysis Lab (MIALab), University of Bern☆30Updated last year
- A Tensorflow Implementation of Brain Tumor Segmentation using Topological Loss☆33Updated 6 years ago
- Code for NeuroImage: Clinical paper "Automatic post-stroke lesion segmentation on MR images using 3D residual convolutional neural networ…☆32Updated 5 years ago
- [TMI'19 & DLMIA'18] Code for "Multi-Task Deep Learning with Margin Ranking Loss for Lung Nodule Analysis".☆45Updated 5 years ago
- A 3D level set method, based on a paper for X-Ray CT segmentation of root systems in WACV 2018.☆25Updated 6 years ago
- Implementation of quasi-conformal regional flattening of the left atrium☆13Updated 2 years ago
- Automatic tool for standard plane localisation in 3D ultrasound☆26Updated 7 years ago
- This is the official implementation of the method ContIG, for self-supervised learning from medical imaging with genomics☆57Updated 3 years ago