ncrump / MolecularDynamicsLinks
Molecular dynamics simulations in Python and Cython. Simulates Lennard-Jones particles in the NVE ensemble using the Verlet method and higher order Gear integration method.
☆12Updated 10 years ago
Alternatives and similar repositories for MolecularDynamics
Users that are interested in MolecularDynamics are comparing it to the libraries listed below
Sorting:
- A set of tutorials to introduce new users to the MoSDeF (Molecular Simulation Design Framework) toolkit☆27Updated last year
- ☆45Updated 5 years ago
- A force field for the simulation of inorganic-organic interfaces (INTERFACE-CHARMM, INTERFACE-PCFF)☆18Updated last year
- MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments☆27Updated last week
- A framework for conducting polymer reference interaction site model (PRISM) calculations☆44Updated 4 years ago
- python simulation interface for molecular modeling☆99Updated 3 years ago
- Data Science for Materials Science☆65Updated 2 weeks ago
- This python code creates hybrid MD/MC (NAMD/GOMC) simulations for the NVT, NPT, GCMC, and GEMC-NVT ensembles☆45Updated last week
- pyiron_atomistics - an integrated development environment (IDE) for atomistic simulation in computational materials science.☆46Updated this week
- A Python package to compute bond orientational order parameters as defined by Steinhardt, Physical Review B (1983)☆31Updated 7 years ago
- NMRforMD is a python script for the calculation of NMR relaxation time T1 and T2 from molecular dynamics trajectory file.☆25Updated 6 months ago
- Python tool to manipulate Gaussian cube files☆49Updated 2 years ago
- This code shows how to calculate an IR spectrum from a LAMMPS MD simulation.☆53Updated 7 years ago
- Course material for an undergraduate quantum chemistry lab class☆51Updated last year
- ☆34Updated 3 weeks ago
- Interactive Jupyter Notebooks for learning the fundamentals of Density-Functional Theory (DFT)☆77Updated 2 weeks ago
- Molecular Simulation with Machine Learning - On-line workshop, July 13-14, 2020☆22Updated 5 years ago
- Provides some useful information and the LAMMPS input files to model a polymer-metal interface.☆38Updated 4 years ago
- Mirror of https://github.com/lukasturcani/stk - please file issues / fork / star that repo.☆21Updated 3 years ago
- a python package for the interfacial analysis of molecular simulations☆93Updated 2 weeks ago
- Python library written in C++ for calculation of local atomic structural environment☆69Updated last year
- A Python package for estimating diffusion properties from molecular dynamics simulations.☆75Updated 2 weeks ago
- ☆24Updated 2 years ago
- A Set of Tutorials for the LAMMPS Simulation Package☆37Updated last month
- eChem: Jupyter book on theoretical chemistry☆109Updated last month
- ☆61Updated 4 months ago
- Python code for learning Molecular Dynamics simulations☆53Updated 4 years ago
- Flexible storage of chemical topology for molecular simulation☆65Updated this week
- A Python library to calculate elastic properties of materials.☆59Updated 4 months ago
- A framework for processing adsorption data and isotherm fitting☆78Updated 8 months ago