masa-ue / RLfinetuning_Diffusion_BioseqLinks
Code for the tutorial/review paper for RL-based-fine-tuniing. In this code, we especially focus on the design of biological sequences like DNA (enhancers) and RNA (UTRs) design.
☆156Updated last year
Alternatives and similar repositories for RLfinetuning_Diffusion_Bioseq
Users that are interested in RLfinetuning_Diffusion_Bioseq are comparing it to the libraries listed below
Sorting:
- SEIKO is a novel reinforcement learning method to efficiently fine-tune diffusion models in an online setting. Our methods outperform all…☆29Updated last year
- Inference-Time Alignment in Protein Diffusion Models☆48Updated 11 months ago
- Official codebase for Exact Energy-Guided Diffusion Sampling via Contrastive Energy Prediction☆35Updated 2 years ago
- Simple Guidance Mechanisms for Discrete Diffusion Models☆64Updated last year
- Derivative-Free Guidance in Diffusion Models with Soft Value-Based Decoding. For controlled generation in DNA, RNA, proteins, molecules (…☆35Updated last year
- [ICML 2025] The official implementation of the paper "On the Guidance of Flow Matching"☆71Updated 3 months ago
- A general framework for inference-time scaling and steering of diffusion models with arbitrary rewards.☆202Updated 6 months ago
- Official Jax Implementation of MD4 Masked Diffusion Models☆149Updated 10 months ago
- Code for the paper: "Fine-Tuning Discrete Diffusion Models with Policy Gradient Methods"☆31Updated 7 months ago
- Reward fine-tuning for Stable Diffusion models based on stochastic optimal control, including Adjoint Matching☆58Updated 7 months ago
- Code repository for Trajectory Flow Matching☆96Updated last year
- Implementation of Particle Guidance: non-I.I.D. Diverse Sampling with Diffusion Models☆75Updated 2 years ago
- Official Code for Paper "Think While You Generate: Discrete Diffusion with Planned Denoising" [ICLR 2025]☆84Updated 8 months ago
- ☆41Updated last year
- 📰 Must-Read Papers on Offline Model-Based Optimization 🔥☆29Updated 6 months ago
- code for "Generalized Schrödinger Bridge Matching" (ICLR 2024).☆84Updated last year
- Code for the paper "Training Diffusion Models with Reinforcement Learning"☆546Updated 2 years ago
- Annotated Flow Matching paper☆224Updated last year
- Code for paper: "Fine-Tuning Discrete Diffusion Models via Reward Optimization with Applications to DNA and Protein Design"☆63Updated 7 months ago
- Minimal Implementation of a D3PM in pytorch☆281Updated last year
- Official codebase for Exact Energy-Guided Diffusion Sampling via Contrastive Energy Prediction (ICML 2023)☆50Updated 2 years ago
- Official codebase for the paper "How to build a consistency model: Learning flow maps via self-distillation" (NeurIPS 2025).☆63Updated 2 months ago
- Official PyTorch implementation for "Your Absorbing Discrete Diffusion Secretly Models the Conditional Distributions of Clean Data" (ICLR…☆73Updated 7 months ago
- Reproduce ICLR2025 Energy-Based Diffusion Language Models for Text Generation☆52Updated 5 months ago
- Graph Diffusion Policy Optimization☆41Updated last year
- ☆37Updated last year
- Educational implementation of the Discrete Flow Matching paper☆125Updated last year
- ☆25Updated last year
- ☆171Updated 2 months ago
- Code for the paper https://arxiv.org/abs/2402.04997☆101Updated last year