Alternatives and similar repositories for automind

Users that are interested in automind are comparing it to the libraries listed below

• Dynamics-of-Neural-Systems-Lab / MARBLE
  Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portr…
  ☆78Updated last week
• engellab / neuralflow
  The framework for inferring Langevin dynamics from spike data
  ☆41Updated 2 months ago
• catniplab / latent_dynamics_workshop
  Exercises and examples for the latent dynamics workshop
  ☆19Updated 3 weeks ago
• egokcen / mDLAG
  A dimensionality reduction framework for characterizing the multi-dimensional, concurrent flow of signals across multiple neuronal popula…
  ☆16Updated 4 months ago
• erikher / GridCellTorus
  ☆32Updated last year
• flatironinstitute / kachery-cloud
  ☆22Updated 9 months ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆101Updated last week
• AllenInstitute / openscope_databook
  OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…
  ☆71Updated 3 weeks ago
• glaserlab / sca
  Sparse Component Analysis: An unsupervised method for recovering interpretable latent factors
  ☆28Updated 6 months ago
• davindicode / cosyne-2023-generative-models
  Notebooks from the workshop tutorial implementing and discussing a range of generative models commonly used in neuroscience.
  ☆38Updated 2 years ago
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆53Updated 5 months ago
• catniplab / NeuroTask
  NeuroTask: A Benchmark Dataset for Multi-Task Neural Analysis
  ☆12Updated 3 months ago
• pyrates-neuroscience / PyRates
  Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-i…
  ☆83Updated 2 weeks ago
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆49Updated 10 months ago
• pillowlab / GLMspiketraintutorial_python
  ☆55Updated 2 years ago
• snel-repo / neural-data-transformers
  ☆79Updated 3 years ago
• flatironinstitute / spikeforest2
  SpikeForest -- spike sorting analysis for website -- version 2
  ☆34Updated 2 years ago
• slinderman / ml4nd
  Machine Learning Methods for Neural Data Analysis
  ☆19Updated 2 months ago
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆35Updated last year
• SaberaTalukder / Chen_Institute_DataSAI_for_Neuroscience
  ☆30Updated 3 years ago
• egokcen / DLAG
  A dimensionality reduction framework for disentangling the flow of signals between populations of neurons
  ☆32Updated 3 months ago
• neurallatents / nlb_workshop
  ☆20Updated 3 years ago
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆102Updated this week
• neurallatents / nlb_tools
  Python tools for participating in Neural Latents Benchmark '21
  ☆61Updated last year
• ShanechiLab / torchDFINE
  ☆30Updated last year
• lindermanlab / PPSeq.jl
  Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains
  ☆67Updated 2 years ago
• NII-Kobayashi / GLMCC
  GLMCC: The generalized linear model for spike cross-correlation (Kobayashi et al., Nature Communications, 2019)
  ☆35Updated 2 years ago
• BeNeuroLab / 2022-preserved-dynamics
  2023: Preserved neural dynamics across animals performing similar behaviour
  ☆13Updated last month
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆70Updated 2 years ago
• JoramKeijser / MIND
  Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18
  ☆30Updated 6 years ago