kylebeggs / DeepCenterline
Model for finding a centerline distance map of blood vessel segmentations to then be fed into a graph minimum path extractor to find the centerlines of a vessel using PyTorch. It uses a Residual UNet (Convolutional AutoEncoder) type architecture.
☆14Updated 2 years ago
Alternatives and similar repositories for DeepCenterline:
Users that are interested in DeepCenterline are comparing it to the libraries listed below
- 根据最短路径回溯算法提取血管的中心线☆28Updated 4 years ago
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆28Updated 3 years ago
- ☆12Updated 4 years ago
- The public brain 3D vessel datasets, include TubeTK and MIDAS.☆34Updated 3 years ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆40Updated 4 years ago
- Supporting data for the study "Reconstruction and structured meshing of coronary arteries from X-ray angiography"☆23Updated 3 years ago
- Enhance vessel structures in 3D images using Hessian/Frangi/eigenvalue filter through the ITK library☆18Updated 3 years ago
- There are some examples of 3D Medical Image Process☆40Updated 4 years ago
- The code of paper "Transformer-based 3D U-Net for Pulmonary Vessel Segmentation and Artery-vein Separation from CT images"☆24Updated last year
- Vessel and tube centerline extraction☆29Updated 6 months ago
- ☆17Updated 5 months ago
- The paper is under review, and the complete code will be public when the paper is accepted.☆12Updated 3 years ago
- Statistical shape model of the heart☆43Updated 8 years ago
- A software to edit, model and mesh vascular networks from centerlines.☆19Updated 10 months ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆28Updated 4 years ago
- Repository for Vesselness algorithms☆44Updated 7 months ago
- Pytorch Implement of EE-Net (IEEE TIP)☆29Updated last year
- Structure and position aware graph neural network for airway labeling☆14Updated 2 years ago
- Coronary artery centerline extraction from CT image (.mha format) 从心脏CT图像提取冠状动脉中心线☆41Updated 5 years ago
- [MICCAI'23] Topology Repairing of Disconnected Pulmonary Airways and Vessels: Baselines and a Dataset☆30Updated 7 months ago
- 透過 3D Unet 將心臟的冠狀動脈(包含 左冠狀動脈、有冠狀動脈、左迴旋支、左前降支、右後降支等) 分割出來,其他的後續應用及其研究是秘密歐。 Dataset 來自聯新醫院,並自己 Label 製作而成。☆36Updated 3 years ago
- COSTA: A Multi-center Multi-vendor TOF-MRA Dataset and A Novel Cerebrovascular Segmentation Network☆20Updated 5 months ago
- Brain vessel segmentation using 3D convolutional neural networks☆42Updated 2 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆48Updated 6 months ago
- Official repository of MICCAI 2022 Challenge: KiPA22☆12Updated 2 years ago
- ☆12Updated 2 years ago
- Self-supervised learning enables excellent 3D digital subtraction angiography reconstruction from ultra-sparse 2D projection views☆23Updated 2 years ago
- 3D cerebrovascular volume segmentation in Pytorch.☆25Updated 2 years ago
- A library for coronary artery reconstruction from angriography, OCT + angiography, (specifically for CFD usage) statistical shape modelli…☆12Updated 3 years ago