kylebeggs / DeepCenterline
Model for finding a centerline distance map of blood vessel segmentations to then be fed into a graph minimum path extractor to find the centerlines of a vessel using PyTorch. It uses a Residual UNet (Convolutional AutoEncoder) type architecture.
☆14Updated 2 years ago
Alternatives and similar repositories for DeepCenterline:
Users that are interested in DeepCenterline are comparing it to the libraries listed below
- Supporting data for the study "Reconstruction and structured meshing of coronary arteries from X-ray angiography"☆25Updated 3 years ago
- 根据最短路径回溯算法提取血管的中心线☆28Updated 4 years ago
- Pytorch Implement of EE-Net (IEEE TIP)☆30Updated last year
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆28Updated 3 years ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆40Updated 5 years ago
- Coronary artery centerline extraction from CT image (.mha format) 从心脏CT图像提取冠状动脉中心线☆42Updated 5 years ago
- ☆12Updated 4 years ago
- 透過 3D Unet 將心臟的冠狀動脈(包含 左冠狀動脈、有冠狀動脈、左迴旋支、左前降支、右後降支等) 分割出來，其他的後續應用及其研究是秘密歐。 Dataset 來自聯新醫院，並自己 Label 製作而成。☆36Updated 3 years ago
- ☆16Updated 3 years ago
- Segmentation of blood vessel from CTA scan using bone subtraction and an iterative thresholding seeking algorithm☆11Updated 3 years ago
- There are some examples of 3D Medical Image Process☆40Updated 4 years ago
- Structure and position aware graph neural network for airway labeling☆14Updated 3 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆52Updated last week
- ☆34Updated 5 years ago
- [MICCAI'23] Topology Repairing of Disconnected Pulmonary Airways and Vessels: Baselines and a Dataset☆32Updated 10 months ago
- Enhance vessel structures in 3D images using Hessian/Frangi/eigenvalue filter through the ITK library☆18Updated 3 years ago
- Weakly-supervised Biomechanically-constrained CT/MRI Registration of the Spine☆26Updated last year
- Brain vessel segmentation using 3D convolutional neural networks☆42Updated 2 years ago
- Repository for Vesselness algorithms☆47Updated 10 months ago
- Vessel and tube centerline extraction☆31Updated 2 weeks ago
- The public brain 3D vessel datasets, include TubeTK and MIDAS.☆36Updated 3 years ago
- The code of paper "Transformer-based 3D U-Net for Pulmonary Vessel Segmentation and Artery-vein Separation from CT images"☆28Updated last year
- code for "Segmentation and Vascular Vectorization for Coronary Artery by Geometry-based Cascaded Neural Network"☆15Updated last year
- Official repository for LiftReg: Limited Angle 2D/3D Deformable Registration.☆18Updated 10 months ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆29Updated 5 years ago
- COSTA: A Multi-center Multi-vendor TOF-MRA Dataset and A Novel Cerebrovascular Segmentation Network☆24Updated 7 months ago
- Deep 3D Vessel Segmentation based on Cross Transformer Network☆18Updated 2 years ago
- plaque detection using CNN☆12Updated 5 years ago
- ☆32Updated last year
- ☆13Updated 3 years ago