kylebeggs / DeepCenterlineLinks
Model for finding a centerline distance map of blood vessel segmentations to then be fed into a graph minimum path extractor to find the centerlines of a vessel using PyTorch. It uses a Residual UNet (Convolutional AutoEncoder) type architecture.
☆17Updated 3 years ago
Alternatives and similar repositories for DeepCenterline
Users that are interested in DeepCenterline are comparing it to the libraries listed below
Sorting:
- COSTA: A Multi-center Multi-vendor TOF-MRA Dataset and A Novel Cerebrovascular Segmentation Network☆35Updated last year
- Pytorch Implement of EE-Net (IEEE TIP)☆30Updated last year
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆29Updated 3 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆54Updated 6 months ago
- The code of paper "Transformer-based 3D U-Net for Pulmonary Vessel Segmentation and Artery-vein Separation from CT images"☆34Updated 6 months ago
- [MICCAI'23] Topology Repairing of Disconnected Pulmonary Airways and Vessels: Baselines and a Dataset☆37Updated last month
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆41Updated 5 years ago
- There are some examples of 3D Medical Image Process☆42Updated 5 years ago
- Implementation of the DeepVesselNet deep learning network☆153Updated 2 years ago
- ☆34Updated 6 years ago
- The public brain 3D vessel datasets, include TubeTK and MIDAS.☆42Updated 3 years ago
- 透過 3D Unet 將心臟的冠狀動脈(包含 左冠狀動脈、有冠狀動脈、左迴旋支、左前降支、右後降支等) 分割出來，其他的後續應用及其研究是秘密歐。 Dataset 來自聯新醫院，並自己 Label 製作而成。☆37Updated 4 years ago
- A segmentation network for intracranial aneurysm on CTA images using pytorch☆49Updated 2 years ago
- selected code for 3D-2D image registration using deep learning☆14Updated last year
- Enhance vessel structures in 3D images using Hessian/Frangi/eigenvalue filter through the ITK library☆18Updated 4 years ago
- 根据最短路径回溯算法提取血管的中心线☆29Updated 5 years ago
- Optimization-GradientOrientation based 3D/2D registration algorithm of medical imaging☆39Updated 5 years ago
- ☆73Updated 4 years ago
- Supporting data for the study "Reconstruction and structured meshing of coronary arteries from X-ray angiography"☆26Updated 4 years ago
- This is a repository that contains codes to generate DRR from a CT scan☆16Updated 7 years ago
- Landmark detection engine for 3D medical images (MICCAI workshop 2021)☆46Updated last month
- Statistical shape model of the heart☆48Updated 9 years ago
- Automatic classification of tertiary bronchi based on bronchus masks using a rule-based approach.☆44Updated 2 years ago
- Brain vessel segmentation using 3D convolutional neural networks☆43Updated 3 years ago
- Computes vesselness scores for 3-dimensional images.☆71Updated 8 years ago
- [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labeling☆42Updated last year
- This is an official implementation of the MICCAI2024 paper "Self-supervised 3D Skeleton Completion for Vascular Structures".☆14Updated 4 months ago
- Code for Automatic Segmentation of Organs-at-Risk from Head-and-Neck CT using Separable Convolutional Neural Network with Hard-Region-Wei…☆21Updated 5 years ago
- XiaoweiXu / ImageCAS-A-Large-Scale-Dataset-and-Benchmark-for-Coronary-Artery-Segmentation-based-on-CT☆79Updated last year
- Resources of the paper “Deep Learning to Segment Pelvic Bones: Large-scale CT Datasets and Baseline Models”.☆162Updated 3 years ago