kylebeggs / DeepCenterline
Model for finding a centerline distance map of blood vessel segmentations to then be fed into a graph minimum path extractor to find the centerlines of a vessel using PyTorch. It uses a Residual UNet (Convolutional AutoEncoder) type architecture.
☆12Updated 2 years ago
Related projects: ⓘ
- ☆12Updated 3 years ago
- Segmentation of blood vessel from CTA scan using bone subtraction and an iterative thresholding seeking algorithm☆8Updated 3 years ago
- ☆15Updated 3 years ago
- Pytorch Implement of EE-Net (IEEE TIP)☆27Updated 10 months ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆26Updated 4 years ago
- Supporting data for the study "Reconstruction and structured meshing of coronary arteries from X-ray angiography"☆21Updated 3 years ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆37Updated 4 years ago
- There are some examples of 3D Medical Image Process☆40Updated 4 years ago
- Digitally recconstructed radiograph☆22Updated 4 years ago
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆27Updated 2 years ago
- [MICCAI'23] Topology Repairing of Disconnected Pulmonary Airways and Vessels: Baselines and a Dataset☆29Updated 3 months ago
- [IEEE JBHI, 2023] Towards Connectivity-Aware Pulmonary Airway Segmentation☆14Updated 6 months ago
- A library for coronary artery reconstruction from angriography, OCT + angiography, (specifically for CFD usage) statistical shape modelli…☆10Updated 3 years ago
- Repository for Vesselness algorithms☆42Updated 3 months ago
- 3D vessel-like structure segmentation in pytorch☆26Updated last year
- The code of paper "Transformer-based 3D U-Net for Pulmonary Vessel Segmentation and Artery-vein Separation from CT images"☆18Updated last year
- 根据最短路径回溯算法提取血管的中心线☆28Updated 4 years ago
- ☆19Updated this week
- Statistical shape model of the heart☆41Updated 8 years ago
- Deep 3D Vessel Segmentation based on Cross Transformer Network☆17Updated 2 years ago
- A software to edit, model and mesh vascular networks from centerlines.☆16Updated 6 months ago
- COSTA: A Multi-center Multi-vendor TOF-MRA Dataset and A Novel Cerebrovascular Segmentation Network☆18Updated last month
- Simple Atas-Based Segmentation☆12Updated 4 years ago
- ☆32Updated last year
- [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labeling☆34Updated 8 months ago
- ☆34Updated 5 years ago
- Weakly-supervised Biomechanically-constrained CT/MRI Registration of the Spine☆22Updated last year
- Landmark detection engine for 3D medical images (MICCAI workshop 2021)☆35Updated 2 months ago
- Coronary artery centerline extraction from CT image (.mha format) 从心脏CT图像提取冠状动脉中心线☆41Updated 4 years ago
- Brain vessel segmentation using 3D convolutional neural networks☆39Updated 2 years ago