kylebeggs / DeepCenterlineLinks
Model for finding a centerline distance map of blood vessel segmentations to then be fed into a graph minimum path extractor to find the centerlines of a vessel using PyTorch. It uses a Residual UNet (Convolutional AutoEncoder) type architecture.
☆17Updated 3 years ago
Alternatives and similar repositories for DeepCenterline
Users that are interested in DeepCenterline are comparing it to the libraries listed below
Sorting:
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆29Updated 3 years ago
- Supporting data for the study "Reconstruction and structured meshing of coronary arteries from X-ray angiography"☆26Updated 4 years ago
- ☆34Updated 5 years ago
- Implementation of the DeepVesselNet deep learning network☆151Updated 2 years ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆39Updated 5 years ago
- Pytorch Implement of EE-Net (IEEE TIP)☆30Updated last year
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆54Updated 4 months ago
- Statistical shape model of the heart☆47Updated 8 years ago
- The code of paper "Transformer-based 3D U-Net for Pulmonary Vessel Segmentation and Artery-vein Separation from CT images"☆32Updated 4 months ago
- 透過 3D Unet 將心臟的冠狀動脈(包含 左冠狀動脈、有冠狀動脈、左迴旋支、左前降支、右後降支等) 分割出來，其他的後續應用及其研究是秘密歐。 Dataset 來自聯新醫院，並自己 Label 製作而成。☆36Updated 3 years ago
- ☆12Updated 4 years ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆51Updated 4 months ago
- Landmark detection engine for 3D medical images (MICCAI workshop 2021)☆45Updated 2 weeks ago
- The public brain 3D vessel datasets, include TubeTK and MIDAS.☆41Updated 3 years ago
- Python Vascular Network Analysis☆26Updated 2 weeks ago
- [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labeling☆42Updated last year
- There are some examples of 3D Medical Image Process☆42Updated 5 years ago
- [MICCAI'23] Topology Repairing of Disconnected Pulmonary Airways and Vessels: Baselines and a Dataset☆37Updated last year
- 根据最短路径回溯算法提取血管的中心线☆29Updated 5 years ago
- COSTA: A Multi-center Multi-vendor TOF-MRA Dataset and A Novel Cerebrovascular Segmentation Network☆29Updated 11 months ago
- Brain vessel segmentation using 3D convolutional neural networks☆43Updated 3 years ago
- Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]☆66Updated 2 years ago
- Automatic classification of tertiary bronchi based on bronchus masks using a rule-based approach.☆43Updated 2 years ago
- Enhance vessel structures in 3D images using Hessian/Frangi/eigenvalue filter through the ITK library☆18Updated 4 years ago
- A qt-based 3D data visualization tool.☆54Updated 3 years ago
- Weakly-supervised Biomechanically-constrained CT/MRI Registration of the Spine☆27Updated 2 years ago
- XiaoweiXu / ImageCAS-A-Large-Scale-Dataset-and-Benchmark-for-Coronary-Artery-Segmentation-based-on-CT☆74Updated last year
- Resources of the paper “Deep Learning to Segment Pelvic Bones: Large-scale CT Datasets and Baseline Models”.☆158Updated 3 years ago
- Vessel and tube centerline extraction☆34Updated 4 months ago
- 3D vessel-like structure segmentation in pytorch☆31Updated 2 years ago