Cell type annotation with local Large Language Models (LLMs) - Ensuring privacy and speed with extensive customized reports
☆152Oct 25, 2024Updated last year
Alternatives and similar repositories for ceLLama
Users that are interested in ceLLama are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A differential and enrichment analyses pipeline for bulk ATAC-seq (and RNA-seq)☆16Feb 9, 2026Updated 5 months ago
- Tiny, rough-and-ready quantum circuit simulator for exploring quantum networking and computing.☆34May 1, 2024Updated 2 years ago
- A fast seed-embed-extend based sequence mapper and aligner☆23Aug 28, 2024Updated last year
- Build, Improve Performance, and Productionize your AI Application☆344Nov 26, 2024Updated last year
- Fun with wgpu: Simulating slime mold☆24Aug 22, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Plasmid and primer design software☆138Dec 21, 2025Updated 7 months ago
- gpt-o1 like chain of thoughts with local LLMs in R☆31Oct 15, 2024Updated last year
- An Elixir wrapper of the ollama REST API☆13Feb 14, 2025Updated last year
- Code for the BRAIN Initiative Cell Census Network (BICCN) - RF1 Tilgner☆22May 1, 2024Updated 2 years ago
- Workflows for health technology Assessments in R using Discrete EveNts☆12Updated this week
- Your toolkit for autonomous, evolving agent ecosystems. Create, execute, govern, and evolve agents that learn from experience, collaborat…☆452Updated this week
- Basic Local Alignment and Search Tool for Oxford Nanopore Long Sequences☆10Aug 1, 2016Updated 9 years ago
- This package implements 1D and 2D blood flow models for arterial circulation using Trixi.jl, enabling efficient numerical simulation and …☆43Jun 28, 2026Updated 3 weeks ago
- LLM Analytics☆714Jul 8, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Self-hosted environment for programming tutorial by LLM☆299Updated this week
- Free and source-available Apache 2.0 licensed lightweight workflow automation tool.☆313Updated this week
- TypeScript AI platform with AI chat, Autonomous agents, Software developer agents, chatbots and more☆1,195Dec 22, 2025Updated 7 months ago
- A minimal, configurable and highly optimized markdown2html compiler, supports macros, watch mode, syntax highlighting, latex math and liv…☆14Aug 10, 2023Updated 2 years ago
- Cellenium is a FAIR and scalable interactive visual analytics app for scRNA-Seq data (single-cell RNA sequencing).☆28Nov 22, 2023Updated 2 years ago
- Bayesian Optimization as a Coverage Tool for Evaluating LLMs. Accurate evaluation (benchmarking) that's 10 times faster with just a few l…☆290May 16, 2026Updated 2 months ago
- R MCP Server☆206Updated this week
- Rapid and robust analysis of RNA-Seq experiments.☆32Apr 16, 2016Updated 10 years ago
- Functional ultrasound through the skull☆35Nov 26, 2025Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Fine-tune LLM agents with online reinforcement learning☆1,253Mar 19, 2024Updated 2 years ago
- Add a convex hull geom to ggplot2☆52Jul 19, 2017Updated 9 years ago
- A multi-player tournament benchmark that tests LLMs in social reasoning, strategy, and deception. Players engage in public and private co…☆301Jan 7, 2026Updated 6 months ago
- A bring-your-own-key browser extension for summarizing Hacker News articles with LLMs☆54Jan 24, 2025Updated last year
- A count based method for detecting doublets from single nucleus ATAC-seq (snATAC-seq) data.☆34Jan 3, 2023Updated 3 years ago
- RAG Logger is an open-source logging tool designed specifically for Retrieval-Augmented Generation (RAG) applications. It serves as a lig…☆226Dec 24, 2024Updated last year
- ⚠️ [Archived] ⚠️ Self-updating MCP server to cross-ref latest official pip, conda, poetry, uv, pixi, and pdm docs☆41Feb 15, 2026Updated 5 months ago
- ☆140Jul 12, 2020Updated 6 years ago
- Code and data for GeneGPT.☆428May 8, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- LLM plugin for pulling content from Hacker News☆129May 5, 2025Updated last year
- ☆460Sep 18, 2024Updated last year
- Neum AI is a best-in-class framework to manage the creation and synchronization of vector embeddings at large scale.☆864Jan 15, 2024Updated 2 years ago
- A FUSE interface to the NCBI Sequence Read Archive (SRA)☆31Jan 29, 2020Updated 6 years ago
- Sparse matrix spy plot and sparkline renderer.☆19Nov 18, 2024Updated last year
- ☆261Mar 27, 2024Updated 2 years ago
- AI-managed code blocks in Python ⏪⏩☆465Oct 5, 2023Updated 2 years ago