jg-you / complex-coinfection-inferenceLinks
Bayesian inference of effective contagion models from population level data, with STAN
☆14Updated 5 years ago
Alternatives and similar repositories for complex-coinfection-inference
Users that are interested in complex-coinfection-inference are comparing it to the libraries listed below
Sorting:
- Quantifying and reporting uncertainty in drug discovery predictions with probabilistic models☆11Updated 3 years ago
- Causal and probabilistic reasoning with continuous time dynamical systems☆19Updated 5 months ago
- Probabilistic generative model and efficient algorithm to model reciprocity in directed networks.☆16Updated 2 years ago
- Code to implement the network histogram (Olhede and Wolfe, arXiv:1312.5306)☆11Updated 11 years ago
- D-CODE: Discovering Closed-form ODEs from Observed Trajectories☆15Updated 3 years ago
- Gaussian processes on graphs and lattices in Stan.☆19Updated 10 months ago
- The official implementation of Non-separable Spatio-temporal Graph Kernels via SPDEs.☆16Updated 3 years ago
- Uncertainty and causal emergence in complex networks☆122Updated 4 years ago
- SuNBEaM, (s)pectral (n)on-(b)acktracking (e)igenvalue pseudo-(m)etric, a topological graph distance☆16Updated 6 years ago
- A library for bayesian variable selection☆31Updated last year
- Noisy network measurement with stan☆56Updated 2 weeks ago
- Bayesian sparse regression with regularized shrinkage and conjugate gradient acceleration☆21Updated 8 months ago
- R-package for building and fitting Bayesian ODE models in Stan☆29Updated last year
- Contains methods to uniformly sample graphs with a given degree sequence.☆19Updated 6 years ago
- Code to test Rt estimates against synthetic data☆18Updated 5 years ago
- Dynamic programming algorithms for exact linear clustering in networks.☆16Updated 2 years ago
- ❓y0 (pronounced "why not?") is for causal inference in Python☆67Updated this week
- Covid-19 epidemiology - data and analysis☆11Updated 2 years ago
- C++ implementation of a MCMC sampler for the (canonical) SBM☆11Updated 6 years ago
- Bayesian inference for a logistic regression model in various languages☆43Updated 2 years ago
- Flow stability framework for dynamic community detection in temporal networks