jg-you / complex-coinfection-inferenceLinks
Bayesian inference of effective contagion models from population level data, with STAN
☆14Updated 4 years ago
Alternatives and similar repositories for complex-coinfection-inference
Users that are interested in complex-coinfection-inference are comparing it to the libraries listed below
Sorting:
- Quantifying and reporting uncertainty in drug discovery predictions with probabilistic models☆11Updated 3 years ago
- A package to represent high-order relationships between objects of any type☆35Updated 2 years ago
- Code to implement the network histogram (Olhede and Wolfe, arXiv:1312.5306)☆11Updated 10 years ago
- PyGenStability: Multiscale community detection with generalized Markov Stability☆41Updated last month
- Quantifying structural dissimilarities in networks☆43Updated 2 years ago
- Contains methods to uniformly sample graphs with a given degree sequence.☆19Updated 6 years ago
- Probabilistic generative model and efficient algorithm to model reciprocity in directed networks.☆16Updated last year
- The official implementation of Non-separable Spatio-temporal Graph Kernels via SPDEs.☆16Updated 3 years ago
- Draws a 2D simplicial complex from a list of simplices.☆15Updated 5 years ago
- ☆13Updated 3 years ago
- SIAN (Structural Identifiability ANalyser) is a software for assessing structural identifiability of ODE models.☆22Updated 2 years ago
- Noisy network measurement with stan☆56Updated 4 years ago
- Uncertainty and causal emergence in complex networks☆118Updated 4 years ago
- SuNBEaM, (s)pectral (n)on-(b)acktracking (e)igenvalue pseudo-(m)etric, a topological graph distance☆15Updated 5 years ago
- Covid-19 epidemiology - data and analysis☆11Updated last year
- Motif-based weighted spectral clustering in Python, R and Julia☆28Updated last year
- R package to perform statistical inference in generative models using the Wasserstein distance (requires CGAL)☆28Updated 5 years ago
- Entropy, mutual information and higher order measures from information theory, with various estimators and discretisation methods.☆67Updated 2 years ago
- R-package for building and fitting Bayesian ODE models in Stan☆29Updated last year
- Code and data for the CIKM2021 paper "Learning Ideological Embeddings From Information Cascades"☆11Updated 4 years ago
- Efficient Algorithms for L0 Regularized Learning☆102Updated last year
- An extended package for clustering similarity☆68Updated 8 months ago
- Inference for diffusion processes with the use of `Guided Proposals`☆16Updated 4 years ago
- Recover temporal information from grown trees, using Python☆11Updated 4 years ago
- Learning with Data on Riemannian Manifolds☆10Updated 2 years ago
- ☆18Updated 3 years ago
- egtplot: A python package for 3-Strategy Evolutionary Games☆50Updated 3 months ago
- Material for AMLD 2020 workshop "Bayesian Inference: embracing uncertainty"☆30Updated 3 years ago
- Bayesian inference for a logistic regression model in various languages☆42Updated 2 years ago
- Causal Inference with Invariant Prediction☆25Updated 4 years ago