Alternatives and similar repositories for irods_capability_automated_ingest

Users that are interested in irods_capability_automated_ingest are comparing it to the libraries listed below

• mjstealey / irods-provider-postgres
  iRODS catalog provider in Docker - PostgreSQL ICAT - versions 4.1.x and 4.2.x
  ☆10Updated 6 years ago
• irods-contrib / metalnx-web
  Metalnx Web Application
  ☆38Updated last month
• wtsi-npg / baton
  iRODS client programs and API
  ☆21Updated last week
• irods / irods_training
  ☆18Updated 4 months ago
• EBISPOT / DUO
  Ontology for consent codes and data use requirements
  ☆67Updated 3 years ago
• rabix / benten
  A language server for Common Workflow Language
  ☆66Updated last year
• irods / python-irodsclient
  A Python API for iRODS
  ☆70Updated 2 weeks ago
• common-workflow-library / cwl-patterns
  Patterns commonly encountered when writing CWL workflows
  ☆26Updated 3 years ago
• UtrechtUniversity / yoda
  A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.
  ☆52Updated this week
• HumanCellAtlas / metadata-schema
  This repo is for the metadata schemas associated with the HCA
  ☆67Updated 3 weeks ago
• Mizzou-CBMI / COSMOS2
  Python Scientific Pipeline Management System
  ☆71Updated 2 years ago
• common-workflow-lab / ipython2cwl
  IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.
  ☆17Updated 2 weeks ago
• UtrechtUniversity / davrods
  An Apache WebDAV interface to iRODS
  ☆26Updated this week
• bioteam / minio-irods-gateway
  🔬Experimental Minio (S3) Gateway for iRODS 💾
  ☆12Updated 6 years ago
• BioDepot / BioDepot-workflow-builder
  GUI for creating bioinformatics workflows from Docker containers:
  ☆65Updated 4 months ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated 11 months ago
• galaxyproject / bioblend
  A Python library for interacting with the Galaxy API
  ☆93Updated last week
• cyverse / cyverse-sdk
  A resource for CyVerse developers
  ☆13Updated 5 years ago
• askomics / askomics
  DEPRECATED. See askomics/flaskomics
  ☆21Updated 5 years ago
• marcbux / Hi-WAY
  Heterogeneity-incorporating Workflow ApplicationMaster for YARN
  ☆26Updated 7 years ago
• galaxyproject / galaxy-helm
  Minimal setup required to run Galaxy under Kubernetes
  ☆43Updated 2 weeks ago
• edamontology / edamontology
  EDAM is an ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concept…
  ☆130Updated 3 weeks ago
• refinery-platform / refinery-platform
  The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …
  ☆105Updated 2 years ago
• common-workflow-lab / python-cwlgen
  Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
  ☆29Updated 5 years ago
• common-workflow-language / cwl-utils
  Python utilities for CWL
  ☆40Updated last week
• askomics / flaskomics
  Rebuild of AskOmics
  ☆13Updated 2 months ago
• EBISPOT / OLS
  Ontology Lookup Service from SPOT at EBI
  ☆96Updated 2 years ago
• epam / pipeline-builder
  Pipeline Builder is a JavaScript library for visualizing and constructing bioinformatics workflows, using Workflow Description Language (…
  ☆58Updated last year
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆85Updated last month