Extract equations and context from research papers for LLM coding assistants (arXiv, LaTeX, RAG)
☆33Jul 16, 2026Updated this week
Alternatives and similar repositories for paperpipe
Users that are interested in paperpipe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Claude Code skill that takes PhD students from a pile of papers to a synthesized understanding of what the field knows, what it doesn't…☆50Mar 27, 2026Updated 3 months ago
- Screenshot plugin for Claude Code☆16Dec 26, 2025Updated 6 months ago
- 一个 Claude Code skill —— 一份可用的科研写作教练(中文)。☆64Jul 1, 2026Updated 2 weeks ago
- Agent skills for drafting, revising, auditing, and resubmitting Nature-style journal manuscripts.☆374Updated this week
- Splat: Affinity diagramming tool in a single HTML file. Cluster notes on a board. Organize data visually. Fully local for privacy. Semant…☆21Dec 31, 2025Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Production-ready MCP servers for 70+ APIs — GitHub, Google, Notion, Jira & more. Generated from OpenAPI specs, tested against live APIs. …☆28May 12, 2026Updated 2 months ago
- GraphRAG: Knowledge in Graphs not Documents☆17Jul 5, 2025Updated last year
- 学术论文引言写作全流程 Claude Code Skill —— 从 Zotero 文献提取、PDF 摘要挖掘、自适应引言撰写、引用交叉核验到中英文 DOCX 定稿输出。A Claude Code skill for academic introduction wr…☆28Jun 2, 2026Updated last month
- Connect Claude to your Zotero library — Zotero plugin that mirrors collections as agent-readable folders with Markdown, BibTeX, and AI re…☆17May 21, 2026Updated last month
- A Codex skill for jointly analyzing research papers and code, with a static web reader for follow-up questions.☆21May 11, 2026Updated 2 months ago
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆14Sep 15, 2023Updated 2 years ago
- ☆10Nov 30, 2024Updated last year
- Pytorch implementation of Count-ception and custom CNN counting models for Kaggle Sea Lion Count challenge☆11Jun 30, 2017Updated 9 years ago
- Benchmarking computational doublet-detection methods for single-cell RNA sequencing data☆10Feb 25, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Apr 30, 2021Updated 5 years ago
- ☆16Sep 29, 2023Updated 2 years ago
- social-science-paper-writing 是一个面向社会科学论文写作的 Codex/ChatGPT skill,用于辅助完成选题诊断、研究问题细化、论文大纲搭建、文献综述规划、CNKI/Google Scholar 到 Zotero 的文献工作流、草稿评审、…☆163Jun 2, 2026Updated last month
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated last year
- ☆11May 26, 2023Updated 3 years ago
- Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data☆12May 9, 2025Updated last year
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆14Apr 9, 2022Updated 4 years ago
- shotgun pipeline☆12Apr 3, 2019Updated 7 years ago
- A local HTTP proxy that bridges web applications with AI CLI tools to generate SQL queries for different databases☆17Jan 18, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A python interface for the CIViC db application☆13Updated this week
- Interactive LLM Chatbot that constructs direct and transitive software dependencies as a knowledge graph and answers user's questions lev…☆33Jun 8, 2026Updated last month
- Haplotype-aware Hidden Markov Models for detecting CNVs from bulk RNA-seq☆13Apr 2, 2024Updated 2 years ago
- Relates to the article by Lioy, Cournac et al., Cell, 2018 (Functional partitioning of a bacterial chromosome through the interplay of nu…☆11Aug 19, 2020Updated 5 years ago
- A tissue-specific single-cell biological age model☆14Jul 26, 2023Updated 2 years ago
- Computational identification of targets for CAR-T cell therapy in AML☆22Dec 25, 2022Updated 3 years ago
- Visualizing game of thrones major characters for 5 seasons using d3.js☆14Jul 23, 2017Updated 8 years ago
- Claude Code skill for experiment execution, monitoring, statistical interpretation, and reproducibility verification☆150May 2, 2026Updated 2 months ago
- Tools to gather evidence for structural variation via breakpoint detection.☆21Mar 27, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Example chats from running BioMCP for demonstrations☆17Jun 20, 2025Updated last year
- Search for activating regulatory variants in the tumor genome☆15Apr 11, 2025Updated last year
- ☆15Jul 9, 2026Updated last week
- Workflow to reproduce results and figures for the second BeatAML manuscript☆17Jun 28, 2022Updated 4 years ago
- A clojure library for fuzzy matching of strings.☆16Jul 10, 2015Updated 11 years ago
- Tools for participants in the ICGC-TCGA DREAM Mutation Calling challenge☆15Dec 10, 2015Updated 10 years ago
- Academic workflow skills for paper reading, survey writing, experiment summarization, rebuttal drafting, and weekly lab updates.☆316Apr 5, 2026Updated 3 months ago