harmening / MRIsegmentationLinks
🧠 Automatic MRI segmentation pipeline for consistent FEM and BEM mesh creation from MRI scans of human heads
☆12Updated 6 months ago
Alternatives and similar repositories for MRIsegmentation
Users that are interested in MRIsegmentation are comparing it to the libraries listed below
Sorting:
- Consistent Biventricular Coordinates☆18Updated 3 weeks ago
- MedShapeNet 2.0 | A Large-scale Dataset of 3D Medical Shapes | An updated version of MedShapeNet 1.0☆37Updated 9 months ago
- A MedShapeNet Foundation Model: Learning-Based Multi-Modal Medical Point Cloud Completion☆18Updated 3 months ago
- an open database of human head models and companion optode locations for realistic Monte Carlo photon simulations☆10Updated last year
- Python application to calculate internal dosimetry following MIRD formulation☆11Updated last year
- Surface models of bones created from CT datasets of the open source VSDFullBody database hosted at www.smir.ch.☆11Updated last year
- MuscleMap: An Open-Source, Community-Supported Consortium for Whole-Body Quantitative MRI of Muscle☆31Updated last month
- The official implementation of CortexODE☆30Updated 2 years ago
- Convert NIfTI volume to triangulated mesh using marching cubes☆171Updated 3 months ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…☆45Updated last year
- A deep-learning approach for direct whole-heart mesh reconstruction☆87Updated 2 years ago
- Data Consistent Deep Rigid MRI Motion Correction☆37Updated last year
- Sparsely Annotated Region and Organ Segmentation (SAROS) - A large, heterogeneous, and sparsely annotated segmentation dataset on CT imag…☆51Updated 6 months ago
- ☆25Updated 2 years ago
- ☆14Updated last week
- [ICLR 2025] Learning General-purpose Biomedical Volume Representations using Randomized Synthesis☆76Updated this week
- Code to implement "Efficient Pix2Vox++ for 3D Cardiac Reconstruction from 2D echo views"☆26Updated 4 months ago
- Repository linked to publication: "Spatio-temporal neural distance fields for conditional generative modeling of the heart" presented at …☆13Updated 3 months ago
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆94Updated 10 months ago
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration☆46Updated last month
- This repository contains code to apply vision transformers on surface data☆31Updated 6 months ago
- VQ-VAE + Transformer based synthesis of 3D anatomical imaging data☆60Updated 2 years ago
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆93Updated 6 months ago
- NeSVoR is a package for GPU-accelerated slice-to-volume reconstruction.☆86Updated 2 years ago
- Image analysis approaches to analyze the OAI magnetic resonance images☆26Updated 7 months ago
- STAPLE (Shared Tools for Automatic Personalised Lower Extremity modelling) consists of a collection of methods for generating skeletal mo…☆60Updated 11 months ago
- ☆24Updated last year
- Init with augmentation loss☆17Updated 2 years ago
- MedShapeNet - A Large-Scale Dataset of 3D Medical Shapes for Computer Vision☆79Updated last year
- Baseline codebase for the FOMO25 Challenge at MICCAI2025☆19Updated last week