Alternatives and similar repositories for MRIsegmentation

Users that are interested in MRIsegmentation are comparing it to the libraries listed below

• MuscleMap / MuscleMap
  MuscleMap: An Open-Source, Community-Supported Consortium for Whole-Body Quantitative MRI of Muscle
  ☆72Updated this week
• GLARKI / MedShapeNet2.0
  MedShapeNet 2.0 | A Large-scale Dataset of 3D Medical Shapes | An updated version of MedShapeNet 1.0
  ☆45Updated 4 months ago
• KIT-IBT / Cobiveco
  Consistent Biventricular Coordinates
  ☆22Updated 6 months ago
• MGHPhysicsResearch / MIRDCalculation
  Python application to calculate internal dosimetry following MIRD formulation
  ☆14Updated last year
• jrHoss / MedShapeNet-Foundation-Model
  A MedShapeNet Foundation Model: Learning-Based Multi-Modal Medical Point Cloud Completion
  ☆24Updated 9 months ago
• RWTHmediTEC / VSDFullBodyBoneModels
  Surface models of bones created from CT datasets of the open source VSDFullBody database hosted at www.smir.ch.
  ☆11Updated 2 years ago
• neurolabusc / nii2mesh
  Convert NIfTI volume to triangulated mesh using marching cubes
  ☆182Updated 9 months ago
• m-qiang / CortexODE
  The official implementation of CortexODE
  ☆35Updated 2 years ago
• ai-med / Vox2Cortex
  ☆78Updated 8 months ago
• gattia / ShapeMedKnee
  ☆14Updated last year
• AmigoLab / SynthAnatomy
  VQ-VAE + Transformer based synthesis of 3D anatomical imaging data
  ☆62Updated 3 years ago
• fkong7 / MeshDeformNet
  A deep-learning approach for direct whole-heart mesh reconstruction
  ☆98Updated 3 years ago
• BlueBrain / VessMorphoVis
  A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…
  ☆50Updated 2 years ago
• mazurowski-lab / SlicerSegmentWithSAM
  3D Slicer extension for Segment Anything Model (SAM) developed by Meta
  ☆69Updated 8 months ago
• m-qiang / PialNN
  Pial Neural Network
  ☆20Updated 4 years ago
• SlicerDMRI / SlicerDMRI
  Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
  ☆85Updated last month
• nalinimsingh / neuroMoCo
  Data Consistent Deep Rigid MRI Motion Correction
  ☆37Updated 2 years ago
• MCM-Fischer / VSDFullBodyBoneModels
  Surface models of bones created from CT datasets of the open source VSDFullBody database.
  ☆14Updated 2 years ago
• hossein-momeni / DiffVox
  ☆34Updated 11 months ago
• neuropoly / totalspineseg
  Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…
  ☆84Updated last week
• MIC-DKFZ / MITK-Diffusion
  MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit
  ☆102Updated 4 months ago
• gattia / pymskt
  Python Musculoskeletal Tools
  ☆19Updated 3 months ago
• mazurowski-lab / CT-Muscle-and-Fat-Segmentation
  ☆38Updated 6 months ago
• ivadomed / multimodal-registration
  Repository for training and using a contrast agnostic registration model based on the work done in SynthMorph. The contrast agnostic regi…
  ☆13Updated 2 years ago
• physimals / quantiphyse
  Application for analysis and modelling of volumetric medical imaging data
  ☆30Updated last year
• UMEssen / SALT
  Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…
  ☆81Updated last week
• mazurowski-lab / SegmentAnyBone
  SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
  ☆116Updated last year
• balbasty / nitorch
  Neuroimaging in PyTorch
  ☆100Updated 2 weeks ago
• wumelissa / scatterBrains
  an open database of human head models and companion optode locations for realistic Monte Carlo photon simulations
  ☆14Updated 2 months ago
• WCHN / CTseg
  Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.
  ☆84Updated last month