gizemsogancioglu / biossesLinks
☆13Updated 4 years ago
Alternatives and similar repositories for biosses
Users that are interested in biosses are comparing it to the libraries listed below
Sorting:
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Updated 3 years ago
- BioBert Pytorch☆116Updated 2 years ago
- MedNLI - A Natural Language Inference Dataset For The Clinical Domain☆130Updated 2 years ago
- ☆93Updated 6 years ago
- Pre-trained Language Model for Biomedical Question Answering☆123Updated 2 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Challenge on Textual Inference and Question Entailment in the Medical Domain https://sites.google.com/view/mediqa2019☆52Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆333Updated 3 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆172Updated 2 years ago
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆37Updated 4 months ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- Python wraper for MetaMap☆173Updated 5 years ago
- Conversion from brat-flavored standoff to CoNLL format☆55Updated 4 years ago
- ☆232Updated 8 years ago
- Named Entity Recognition for biomedical entities☆48Updated 2 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆578Updated 2 years ago
- ☆99Updated 3 years ago
- BERT models pretrained on the CORD-19 Kaggle dataset☆15Updated 5 years ago
- ☆122Updated 7 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- PubMed 200k RCT dataset: a large dataset for sequential sentence classification.☆197Updated last year
- This is the code for Negation and Speculation Cue Detection and Scope Resolution using BERT, XLNet and RoBERTa☆34Updated 4 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 7 years ago
- XAI Tutorial for the Explainable AI track in the ALPS winter school 2021☆58Updated 4 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- BioELECTRA☆50Updated 3 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 5 years ago
- Exploring the simple sentence similarity measurements using word embeddings☆99Updated last year
- Pre-trained word embeddings using the text of published clinical case reports.☆14Updated 5 years ago