Alternatives and similar repositories for paccmann

Users that are interested in paccmann are comparing it to the libraries listed below

• drugilsberg / interact
  Implementation of the INtERAcT algorithm
  ☆39Updated 2 years ago
• ehsanasgari / Deep-Proteomics
  ☆52Updated 5 years ago
• samsinai / VAE_protein_function
  Protein function prediction using a variational autoencoder
  ☆95Updated 7 years ago
• kyu999 / biovec
  A new approach for representing biological sequences
  ☆100Updated last year
• idekerlab / DCell
  DCell browser and gene deletion simulator
  ☆124Updated 2 years ago
• dmis-lab / ReSimNet
  Implementation of ReSimNet for drug response similarity prediction
  ☆40Updated last year
• salesforce / provis
  Official code repository of "BERTology Meets Biology: Interpreting Attention in Protein Language Models."
  ☆303Updated 6 months ago
• AstraZeneca / awesome-drug-pair-scoring
  Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)
  ☆96Updated 3 years ago
• ChengF-Lab / 2019-nCoV
  Network-based Drug Repurposing for Human Coronavirus
  ☆40Updated 5 years ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆61Updated 2 years ago
• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆54Updated 3 months ago
• ml-jku / sars-cov-inhibitors-chemai
  Large-scale ligand-based virtual screening for potential SARS-Cov-2 inhibitors using a deep neural network
  ☆52Updated 5 years ago
• songlab-cal / tape-neurips2019
  Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…
  ☆121Updated 4 years ago
• biolib / openprotein
  A PyTorch framework for prediction of tertiary protein structure
  ☆191Updated 4 years ago
• insilicomedicine / BiAAE
  Molecular Generation for Desired Transcriptome Changes with Adversarial Autoencoders
  ☆53Updated 5 years ago
• pybel / pybel
  🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
  ☆137Updated last year
• mheinzinger / SeqVec
  Modelling the Language of Life - Deep Learning Protein Sequences
  ☆74Updated 4 years ago
• GHDDI-AILab / Targeting2019-nCoV
  Information sharing portal about nCov/SARS/MERS for drug discovery
  ☆38Updated last year
• choderalab / assaytools
  Modeling and Bayesian analysis of fluorescence and absorbance assays.
  ☆20Updated 4 years ago
• ddofer / ProFET
  ProFET: Protein Feature Engineering Toolkit for Machine Learning
  ☆58Updated 10 years ago
• unmtransinfo / TCRD
  Code to build the Target Central Resource Database (TCRD).
  ☆11Updated 4 years ago
• eternagame / EternaBrain
  Deep learning to solve RNA design puzzles
  ☆19Updated 9 months ago
• HYsxe / ACME
  Supplementary data for the ACME algorithm
  ☆23Updated 3 years ago
• ATOMScience-org / AMPL
  The ATOM Modeling PipeLine (AMPL) is an open-source, modular, extensible software pipeline for building and sharing models to advance in …
  ☆143Updated 2 months ago
• churchlab / UniRep-analysis
  Analysis and figure code from Alley et al. 2019.
  ☆59Updated 2 years ago
• MaayanLab / SEP-L1000
  Website for visualizing predicted drug side-effects using L1000 data (http://maayanlab.net/SEP-L1000/)
  ☆10Updated 3 years ago
• duolinwang / CapsNet_PTM
  CapsNet for Protein Post-translational Modification site prediction.
  ☆25Updated 6 years ago
• mitmedialab / Evolutron
  A mini-framework to build and train neural networks for molecular biology.
  ☆10Updated 7 years ago
• rickyHong / DeepMind-alphafold-repl
  https://github.com/deepmind/deepmind-research
  ☆44Updated 6 years ago
• dhimmel / SIDER4
  Processing SIDER 4.1: the side effect resource
  ☆23Updated 9 years ago