biodiverse / ubms
Fit models to data from unmarked animals using Stan. Uses a similar interface to the R package 'unmarked', while providing the advantages of Bayesian inference and allowing estimation of random effects.
☆36Updated 3 months ago
Alternatives and similar repositories for ubms:
Users that are interested in ubms are comparing it to the libraries listed below
- Examples from Kéry & Royle's "Applied Hierarchical Modeling in Ecology (Volume I)" converted to NIMBLE☆26Updated 6 years ago
- Accessible intro to JAGS/NIMBLE/Bayesian modeling☆16Updated 2 months ago
- Single-species, Multi-species, and Integrated Spatial Occupancy Models☆55Updated 3 weeks ago
- Code from the book 'Applied Hierarchical Modeling in Ecology'☆39Updated 2 years ago
- R package with functions and data for the book 'Integrated Population Modeling'☆11Updated 2 years ago
- R and JAGS code for the book 'Integrated Population Models'☆23Updated 3 years ago
- GLLVM Workshop material for the BES 2020 Festival of Ecology☆27Updated 9 months ago
- ☆26Updated 6 months ago
- Code from Applied Hierarchical Modeling in Ecology translated to NIMBLE (from JAGS/WinBUGS)☆13Updated 2 years ago
- Univariate and Multivariate Spatial Modeling of Species Abundance☆16Updated 2 months ago
- R package to fit species distribution models (SDMs) using the 'tidymodels' framework☆30Updated last month
- Wrapper function for 'inlabru' for modeling species distribution models from disparate datasets.☆25Updated this week
- Useful tools for constructing species distribution models☆52Updated last week
- ☆18Updated last week
- High dimensional geometry operations - (hypervolume R package)☆23Updated 8 months ago
- Poisson process models for multispecies presence-absence and presence-only data☆13Updated 10 years ago
- steps: Spatially- and Temporally- Explicit Population Simulator☆19Updated last year
- The virtualspecies R package☆17Updated 11 months ago
- R package for camera trap data management☆32Updated last month
- R package with functions and data for the book 'Applied Hierarchical Modeling in Ecology'☆28Updated 2 years ago
- 📦 R package to simulate neutral landscape models 🏔☆65Updated 4 months ago
- Automatic Calculation of Effects for Piecewise Structural Equation Models☆11Updated 4 months ago
- Workshop on mark-recapture analyses in R☆11Updated 10 months ago
- Fit multievent capture-recapture models in R (maximum-likelihood), Nimble and JAGS (Bayesian)☆14Updated 4 years ago
- Stacked Species Distribution Modelling R package☆42Updated 8 months ago
- ☆18Updated 3 years ago
- Material for a workshop on Bayesian analysis of capture-recapture data with hidden Markov models and Nimble☆13Updated 2 years ago
- Species distribution modelling using Gaussian random fields☆14Updated 7 years ago
- an R package for transparent environmental and ecological biophysics☆13Updated last year
- R package to fit integrated SDM models (with PO, PA and abundance data)☆12Updated last month