X-DataInitiative / SCALPEL-ExtractionLinks
SCALPEL extraction library to fetch concepts from flattened SNDS
☆18Updated 4 years ago
Alternatives and similar repositories for SCALPEL-Extraction
Users that are interested in SCALPEL-Extraction are comparing it to the libraries listed below
Sorting:
- This repository host code related SNDS database flattening☆16Updated 2 years ago
- Package contenant des nomenclatures et classifications pour le pmsi☆13Updated 2 months ago
- Health Data Metrics (HDM) a Data Quality assessment Application.☆12Updated 2 years ago
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆40Updated 7 months ago
- Part of the Cohort360 Project @ https://github.com/aphp/Cohort360, backend of the Cohort360 web app @ https://github.com/aphp/Cohort360-F…☆5Updated this week
- 🔬 A data science oriented container launcher☆69Updated 2 years ago
- Référentiel d'évaluation data science responsable et de confiance☆73Updated 10 months ago
- A tool to help improve data quality standards in observational data science.☆164Updated 6 months ago
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆199Updated this week
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- Mapping the MIMIC-III database to the OMOP schema☆139Updated last year
- This repository is now archived. Further development has been moved to https://github.com/medkit-lib/medkit.☆23Updated last year
- *New maintainer/owner needed* Fast ICD-10 and ICD-9 comorbidities, decoding and validation in R. NB use main instead of master for defaul…☆248Updated 6 months ago
- sdcMicro☆88Updated 2 months ago
- ☆269Updated last year
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆82Updated 3 months ago
- ☆12Updated 2 months ago
- A command line tool to easily add an ethics checklist to your data science projects.☆299Updated last year
- ☆12Updated this week
- ☆16Updated last month
- Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.☆125Updated this week
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆140Updated this week
- A FHIR implementation guide that supports conversion of data from FHIR to OMOP and OMOP to FHIR☆14Updated this week
- REST API of Onyxia☆27Updated last week
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆29Updated 2 weeks ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆53Updated this week
- This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.☆82Updated 2 weeks ago
- Baseline models for predicting Length of Stay☆10Updated 2 years ago
- 30-day patient readmission model, developed in collaboration with Sutter Health.☆30Updated 4 years ago