Alternatives and similar repositories for mb:

Users that are interested in mb are comparing it to the libraries listed below

• jingyunc / wmhs
  Automated subdivision of white matter hyperintensities
  ☆12Updated 3 years ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆46Updated last week
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆51Updated 10 months ago
• dama-lab / multi-atlas-segmentation
  Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI
  ☆36Updated 3 months ago
• npnl / PALS
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…
  ☆23Updated last month
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆48Updated this week
• openneuropet / PET2BIDS
  PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…
  ☆27Updated 3 weeks ago
• KMarshallX / VesselBoost
  ☆14Updated 3 months ago
• KUL-Radneuron / KUL_VBG
  A workflow to allow Freesurfer recon-all to run on brain image with gliomas
  ☆29Updated 7 months ago
• aces / CIVET_Full_Project
  CIVET Installer
  ☆26Updated 2 years ago
• CyclotronResearchCentre / spm_auto_reorient
  A few routines to perform "auto reorient" in SPM
  ☆15Updated 2 years ago
• brudfors / spm_superres
  Super-resolution of multimodal clinical magnetic resonance images (MRIs)
  ☆15Updated last year
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆49Updated 2 years ago
• stnava / ANTsTutorial
  Guide to tutorial materials for ANTs/R
  ☆45Updated 6 years ago
• KCL-BMEIS / NiftySeg
  ☆27Updated 2 years ago
• dmritrekker / trekker
  dMRI based fiber tracking using parallel transport tractography
  ☆20Updated this week
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆24Updated last year
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆62Updated this week
• RDadarwal / Diffusion-MRI
  Jupyter notebooks for analyzing diffusion MRI data in order to calculate DTI, DKI, NODDI, SS3T-CSD, and MSMT-CSD modelled parametric maps
  ☆12Updated last year
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆99Updated last month
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆44Updated this week
• neurospin / pyfreesurfer
  A Python project that provides a wrapping over the FreeSurfer software interface.
  ☆9Updated 5 years ago
• DevelopmentalImagingMCRI / karawun
  Convert tractography studies from mrtrix into dicom for use in navigation software
  ☆15Updated last year
• QMICodeBase / TORTOISEV4
  Official TORTOISE Diffusion MRI Processing Pipeline V4 Source Code and Documentation
  ☆22Updated 2 months ago
• wwu-mmll / deepbet
  Fast brain extraction using neural networks
  ☆28Updated 5 months ago
• spm / spm-notebooks
  SPM Notebooks
  ☆11Updated last year
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆142Updated this week
• Entodi / MeshNet
  Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940
  ☆16Updated 6 years ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆57Updated 3 weeks ago
• pBFSLab / FastCSR
  ☆28Updated last year