Alternatives and similar repositories for mb:

Users that are interested in mb are comparing it to the libraries listed below

• dama-lab / multi-atlas-segmentation
  Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI
  ☆36Updated 4 months ago
• CyclotronResearchCentre / spm_auto_reorient
  A few routines to perform "auto reorient" in SPM
  ☆15Updated 2 years ago
• openneuropet / PET2BIDS
  PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…
  ☆27Updated last week
• neurospin / pyfreesurfer
  A Python project that provides a wrapping over the FreeSurfer software interface.
  ☆9Updated 5 years ago
• brudfors / spm_superres
  Super-resolution of multimodal clinical magnetic resonance images (MRIs)
  ☆15Updated last year
• jingyunc / wmhs
  Automated subdivision of white matter hyperintensities
  ☆12Updated 3 years ago
• KMarshallX / VesselBoost
  ☆14Updated 4 months ago
• npnl / PALS
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…
  ☆23Updated 2 months ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆46Updated last month
• aces / CIVET_Full_Project
  CIVET Installer
  ☆26Updated 3 years ago
• dmritrekker / trekker
  dMRI based fiber tracking using parallel transport tractography
  ☆25Updated last week
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆51Updated 11 months ago
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆49Updated 2 years ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆49Updated this week
• wwu-mmll / deepbet
  Fast brain extraction using neural networks
  ☆28Updated 6 months ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆62Updated this week
• KCL-BMEIS / NiftySeg
  ☆27Updated 2 years ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆46Updated last week
• pykao / CT2MNI152
  This repository applies the affine and deformation transformation on the CT scan in the subject space, and register it to the MNI 1mm spa…
  ☆12Updated 9 months ago
• pBFSLab / FastCSR
  ☆28Updated last year
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆45Updated 6 months ago
• SCAN-NRAD / DL-DiReCT
  DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation
  ☆26Updated 4 months ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆34Updated last week
• Medical-Image-Analysis-Laboratory / mialsuperresolutiontoolkit
  The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow too…
  ☆28Updated last year
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆25Updated last year
• BBillot / hypothalamus_seg
  a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans
  ☆25Updated 2 years ago
• pboutinaud / SHIVA_PVS
  Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet
  ☆24Updated 3 months ago
• nipreps / nibabies
  fMRIPrep-Infants - A robust, transparent workflow tailored for neonate and infant MRI
  ☆27Updated last week
• RDadarwal / Diffusion-MRI
  Jupyter notebooks for analyzing diffusion MRI data in order to calculate DTI, DKI, NODDI, SS3T-CSD, and MSMT-CSD modelled parametric maps
  ☆12Updated last year
• benoitberanger / niix2bids
  Automatic BIDS architecture
  ☆13Updated 5 months ago