PARCE version 1.0
☆12Feb 1, 2021Updated 5 years ago
Alternatives and similar repositories for PARCE-1
Users that are interested in PARCE-1 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆29Jul 7, 2023Updated 2 years ago
- Analysis and design of protein-protein or protein-peptide interactions based on atlas database.☆15Sep 27, 2022Updated 3 years ago
- Automated construction of protein chimeras and their analysis.☆15Sep 29, 2023Updated 2 years ago
- Binding pocket optimization based on force fields and docking scoring functions☆38Mar 19, 2025Updated last year
- ☆20May 15, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆38Oct 12, 2022Updated 3 years ago
- Restraintmaker is a tool intended to build Position or Distance restraints for Molecular Dynamics simulations (or any other simulation te…☆19Oct 27, 2022Updated 3 years ago
- Workshop - Analysis of Molecular Dynamics Simulation Using Python☆20Aug 14, 2020Updated 5 years ago
- Fast and versatile biomolecular structure PDB file parser using SQL queries☆24Mar 17, 2023Updated 3 years ago
- ☆29Mar 2, 2021Updated 5 years ago
- Repo contains source code of the SurfaceID paper☆28Mar 13, 2024Updated 2 years ago
- ☆10Mar 10, 2023Updated 3 years ago
- ☆23Mar 28, 2024Updated 2 years ago
- Molecular Explanation Generator☆17Jan 26, 2022Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- VMD plugin to calculate and visualize clusters of conformations for a trajectory☆23Oct 24, 2018Updated 7 years ago
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Jun 25, 2023Updated 2 years ago
- CLI util: Poor man's rpath for Windows executables.☆12Dec 16, 2018Updated 7 years ago
- TorchMD-NET. This is a simple code to train Schnet using pytorch-lighthing.☆11Nov 10, 2021Updated 4 years ago
- Protein prediction models implemented with Modal☆34Jun 2, 2026Updated last week
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆11Apr 14, 2022Updated 4 years ago
- Google Colab Tutorials for IBM3202☆279Nov 6, 2024Updated last year
- ☆17Apr 10, 2024Updated 2 years ago
- Plugins to enable using custom functional forms in SMIRNOFF based force fields☆11Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Collection of tools for running MD, QM, and QM/MM calculations☆21Sep 27, 2025Updated 8 months ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆94Nov 5, 2025Updated 7 months ago
- MOPAC wrapper providing the PM6-ML correction☆22Mar 23, 2026Updated 2 months ago
- AbLang: A language model for antibodies☆17Sep 22, 2023Updated 2 years ago
- A library for Computational Chemistry in the Go programming language☆46Jun 5, 2026Updated last week
- alphafold FAPE loss☆10Sep 28, 2021Updated 4 years ago
- Wrapper script for preparing explicitly solvated systems for molecular dynamics simulations with Amber.☆17Feb 6, 2026Updated 4 months ago
- Wrap up Platform to launch all PELE features. [AdaptivePELE, MSM, LigandGrowing, Glide Rescoring]☆11May 9, 2026Updated last month
- TFN layers built using Tensorflow 2☆15Jul 15, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆30Oct 28, 2022Updated 3 years ago
- Calculate Böttcher score on small molecules (doi.org/10.1021/acs.jcim.5b00723)☆15Sep 20, 2024Updated last year
- Code for holographic machine learning of proteins☆25Oct 29, 2024Updated last year
- A collection of tumour microenvironment single-cell RNA sequencing datasets for use in R and other pipelines.☆21Jul 28, 2025Updated 10 months ago
- ☆20Jun 2, 2026Updated last week
- ☆15Aug 4, 2020Updated 5 years ago
- Stretch fits data for easy visualization☆14Apr 27, 2026Updated last month